RNA–Protein interactions for RNA: ENST00000559557.1

MRPS11-208, Transcript of mitochondrial ribosomal protein S11, human

TSL 3

Gene MRPS11, Length 447 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS11-208	ENST00000559557	PDF	Q9HBH1	243 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	NOX4	Q9NPH5	578 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	SCRT2	Q9NQ03	307 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	DYRK4	Q9NR20	520 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	GPATCH2L	Q9NWQ4	482 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	LHX3	Q9UBR4	397 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	OR12D3	Q9UGF7	316 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	SATB2	Q9UPW6	733 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	MFHAS1	Q9Y4C4	1052 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	PCM1	Q15154	2024 aa		4.22	□□□□□ -1.73
MRPS11-208	ENST00000559557	SHANK1	Q9Y566	2161 aa		4.21	□□□□□ -1.73
MRPS11-208	ENST00000559557	NBAS	A2RRP1	2371 aa		4.21	□□□□□ -1.73
MRPS11-208	ENST00000559557	CDRT15L2	A8MXV6	281 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	PES1	O00541	588 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	MAGEC1	O60732	1142 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ZG16	O60844	167 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	F9	P00740	461 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	GP1BA	P07359	652 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	PLEK	P08567	350 aa	Predicted RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	SRD5A1	P18405	259 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	SDC4	P31431	198 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	MMP12	P39900	470 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	HTR3A	P46098	478 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	RABIF	P47224	123 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	PMP22	Q01453	160 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	CDR2	Q01850	454 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	CA9	Q16790	459 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	TPD52L1	Q16890	204 aa	Predicted RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ISX	Q2M1V0	245 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	KLHL40	Q2TBA0	621 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ESCO2	Q56NI9	601 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ZNF805	Q5CZA5	627 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	RWDD4	Q6NW29	188 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	WDR59	Q6PJI9	974 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	LRRC31	Q6UY01	552 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	MACC1	Q6ZN28	852 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	RBM43	Q6ZSC3	357 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	MARK2	Q7KZI7	788 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	STRADA	Q7RTN6	431 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	VPS36	Q86VN1	386 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	FAM114A1	Q8IWE2	563 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	KLHDC8B	Q8IXV7	354 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	PARP16	Q8N5Y8	322 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	NPW	Q8N729	165 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	RTL3	Q8N8U3	475 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	DENND6B	Q8NEG7	585 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	GJC3	Q8NFK1	279 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	OR2AP1	Q8NGE2	309 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	MAPK15	Q8TD08	544 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	LMX1A	Q8TE12	382 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	FGF11	Q92914	225 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ISG20	Q96AZ6	181 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	TBC1D31	Q96DN5	1066 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	PPP1R16A	Q96I34	528 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	CCDC114	Q96M63	670 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	MCEE	Q96PE7	176 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	LGMN	Q99538	433 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	SYT11	Q9BT88	431 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	WRAP53	Q9BUR4	548 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	KRTAP4-4	Q9BYR3	166 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	TRIM7	Q9C029	511 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	TWSG1	Q9GZX9	223 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ZNF700	Q9H0M5	742 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	LRRC19	Q9H756	370 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ZFP57	Q9NU63	452 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	TAS2R14	Q9NYV8	317 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	KIF17	Q9P2E2	1029 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	APOBEC3B	Q9UH17	382 aa	Known RBP	4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	ANKRD12	Q6UB98	2062 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	AKAP9	Q99996	3911 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	SPTA1	P02549	2419 aa		4.21	□□□□□ -1.74
MRPS11-208	ENST00000559557	USP9X	Q93008	2570 aa	Predicted RBP	4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	DOCK10	Q96BY6	2186 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	C17orf113	A0A1B0GUU1	675 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557		A0A1W2PQM1	296 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	TSPAN11	A1L157	253 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	LMO7DN	F2Z398	122 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	STX16-NPEPL1	H3BU86	382 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	STX16	O14662	325 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	FPGT	O14772	594 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	KDELR3	O43731	214 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	CEP104	O60308	925 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	APOH	P02749	345 aa	Predicted RBP	4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	TK1	P04183	234 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	ATP1A3	P13637	1013 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	SLC2A4	P14672	509 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	TCF4	P15884	667 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	HNRNPH1	P31943	449 aa	Known RBP	4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	ACTN2	P35609	894 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	NR1H2	P55055	460 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	SNRPD1	P62314	119 aa	Known RBP	4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	RALGDS	Q12967	914 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	LY6D	Q14210	128 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	SYCP1	Q15431	976 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	CYTH1	Q15438	398 aa		4.2	□□□□□ -1.74
MRPS11-208	ENST00000559557	ALG11	Q2TAA5	492 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms