RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 C10orf62Q5T681 223 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 SLC25A25Q6KCM7 469 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 GOLGA7Q7Z5G4 137 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 MYLK4Q86YV6 388 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 ZCCHC7Q8N3Z6 543 aaKnown RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 PTGR2Q8N8N7 351 aaPredicted RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 MTBPQ96DY7 904 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 CSF3RQ99062 836 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 MAPKAP1Q9BPZ7 522 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 MRPL57Q9BQC6 102 aaKnown RBP16.43■□□□□ 0.22
SMAD3-210ENST00000559092 ALOXE3Q9BYJ1 711 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 OR51B5Q9H339 312 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 DMRT3Q9NQL9 472 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 ANKRD10Q9NXR5 420 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 PPT2Q9UMR5 302 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 CLCA3PQ9Y6N3 262 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 DOPEY1Q5JWR5 2465 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 MAST4O15021 2626 aa16.43■□□□□ 0.22
SMAD3-210ENST00000559092 A0A1B0GUH1 482 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 EXOC1LA0A1B0GW35 172 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 ASPDHA6ND91 283 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 LRRC14BA6NHZ5 514 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 TRIM49D1C9J1S8 452 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 ZFAND5O76080 213 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 SIX3O95343 332 aaPredicted RBP16.42■□□□□ 0.22
SMAD3-210ENST00000559092 CLDN9O95484 217 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 MLYCDO95822 493 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 IFNA16P05015 189 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 RAP1GDS1P52306 607 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 PER3P56645 1201 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 CUL3Q13618 768 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 DDX39BQ13838 428 aaKnown RBP16.42■□□□□ 0.22
SMAD3-210ENST00000559092 TIFABQ6ZNK6 161 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 FAM98AQ8NCA5 519 aaKnown RBP16.42■□□□□ 0.22
SMAD3-210ENST00000559092 MORN4Q8NDC4 146 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 MTERF1Q99551 399 aaKnown RBP16.42■□□□□ 0.22
SMAD3-210ENST00000559092 CCDC77Q9BR77 488 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 NTMT1Q9BV86 223 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 MRPL46Q9H2W6 279 aaKnown RBP16.42■□□□□ 0.22
SMAD3-210ENST00000559092 ZNF358Q9NW07 568 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 SEC14L3Q9UDX4 400 aa16.42■□□□□ 0.22
SMAD3-210ENST00000559092 PLEKHB1Q9UF11 243 aaPredicted RBP16.42■□□□□ 0.22
SMAD3-210ENST00000559092 SPTBN1Q01082 2364 aaKnown RBP16.42■□□□□ 0.22
SMAD3-210ENST00000559092 TRBV11-1A0A0K0K1C0 115 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 RTCAO00442 366 aaKnown RBP16.41■□□□□ 0.22
SMAD3-210ENST00000559092 LRRTM2O43300 516 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 RNF224P0DH78 156 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 CPN2P22792 545 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 MST1P26927 711 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 PPP2R1BP30154 601 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 TLX1P31314 330 aaPredicted RBP16.41■□□□□ 0.22
SMAD3-210ENST00000559092 SLAMF1Q13291 335 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 CPSF6Q16630 551 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMAD3-210ENST00000559092 KRTCAP3Q53RY4 240 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 ZNF468Q5VIY5 522 aaPredicted RBP16.41■□□□□ 0.22
SMAD3-210ENST00000559092 ADGRD1Q6QNK2 874 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 GFRALQ6UXV0 394 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 CLNKQ7Z7G1 428 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 GPR180Q86V85 440 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 LCA5Q86VQ0 697 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 OR14A16Q8NHC5 309 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 UHMK1Q8TAS1 419 aaKnown RBP16.41■□□□□ 0.22
SMAD3-210ENST00000559092 PTPMT1Q8WUK0 201 aaPredicted RBP16.41■□□□□ 0.22
SMAD3-210ENST00000559092 TANKQ92844 425 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 NCLNQ969V3 563 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 ATP6V1E2Q96A05 226 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 TMEM125Q96AQ2 219 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 PHF21BQ96EK2 531 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 SCYL1Q96KG9 808 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 NOL11Q9H8H0 719 aaKnown RBP16.41■□□□□ 0.22
SMAD3-210ENST00000559092 KLHL1Q9NR64 748 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 XPR1Q9UBH6 696 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 FETUBQ9UGM5 382 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 PHF11Q9UIL8 331 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 FBXW2Q9UKT8 454 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 RNF11Q9Y3C5 154 aa16.41■□□□□ 0.22
SMAD3-210ENST00000559092 HIVEP3Q5T1R4 2406 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 UTP20O75691 2785 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 SAP18O00422 153 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 PLPP1O14494 284 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 OR7A17O14581 309 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 SH3BGRLO75368 114 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 SLC25A12O75746 678 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 CCNG1P51959 295 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 RPS13P62277 151 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 ZRSR2Q15696 482 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 HSDL2Q6YN16 418 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 EIF1ADQ8N9N8 165 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 OR8K3Q8NH51 312 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 WDR20Q8TBZ3 569 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 THAP3Q8WTV1 239 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 RELTQ969Z4 430 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 ANKRD9Q96BM1 317 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 RPF2Q9H7B2 306 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 DDX31Q9H8H2 851 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 ZNF223Q9UK11 482 aaPredicted RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 PCTPQ9UKL6 214 aa16.4■□□□□ 0.22
SMAD3-210ENST00000559092 YARS2Q9Y2Z4 477 aaKnown RBP16.4■□□□□ 0.22
SMAD3-210ENST00000559092 RIPK2O43353 540 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms