RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SLAMF1Q13291 335 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 ELOAQ14241 798 aaKnown RBP11.24□□□□□ -0.61
TPM1-216ENST00000558910 NAA30Q147X3 362 aaPredicted RBP11.24□□□□□ -0.61
TPM1-216ENST00000558910 ZRSR2Q15696 482 aaKnown RBP11.24□□□□□ -0.61
TPM1-216ENST00000558910 TBCCQ15814 346 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 EXT1Q16394 746 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 TSNAXIP1Q2TAA8 658 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 ACER2Q5QJU3 275 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 PLAG1Q6DJT9 500 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 NIPAL1Q6NVV3 410 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 C16orf47Q6ZP98 133 aaPredicted RBP11.24□□□□□ -0.61
TPM1-216ENST00000558910 QSOX2Q6ZRP7 698 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 CHSY3Q70JA7 882 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 ACOT4Q8N9L9 421 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 SUN3Q8TAQ9 357 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 WDR34Q96EX3 536 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 CMTM7Q96FZ5 175 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 KCNC2Q96PR1 638 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 LMF1Q96S06 567 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 NPAS2Q99743 824 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 FUT8Q9BYC5 575 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 ALG2Q9H553 416 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 TIMMDC1Q9NPL8 285 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 DMRT3Q9NQL9 472 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 PRDM7Q9NQW5 492 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 TMEM216Q9P0N5 145 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 TEKT2Q9UIF3 430 aa11.24□□□□□ -0.61
TPM1-216ENST00000558910 TNPO3Q9Y5L0 923 aaKnown RBP11.24□□□□□ -0.61
TPM1-216ENST00000558910 UTP20O75691 2785 aaKnown RBP11.24□□□□□ -0.61
TPM1-216ENST00000558910 IQANK1A0A1B0GTG1 560 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 A0A1W2PPM1 405 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 TLDC2A0PJX2 215 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 SAGE2PA6NJ88 616 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 GLOD5A6NK44 160 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 WASHC1A8K0Z3 465 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 GABRR3A8MPY1 467 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 E2F3O00716 465 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 CLDN4O14493 209 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 CLDN9O95484 217 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 ETHE1O95571 254 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 ABHD2P08910 425 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 CNTFP26441 200 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 MAGEA12P43365 314 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 TNFSF10P50591 281 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 UBAP2LQ14157 1087 aaKnown RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 PCBP2Q15366 365 aaKnown RBP eCLIP11.23□□□□□ -0.61
TPM1-216ENST00000558910 FHL5Q5TD97 284 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 KHDRBS2Q5VWX1 349 aaKnown RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 SPINK14Q6IE38 97 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 OR4C11Q6IEV9 310 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 FAM180AQ6UWF9 173 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 IGFL2Q6UWQ7 119 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 CCDC91Q7Z6B0 441 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 MILR1Q7Z6M3 343 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 LAS2Q8IYD9 372 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 GALNT11Q8NCW6 608 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 M1APQ8TC57 530 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 TRPC4APQ8TEL6 797 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 NCLNQ969V3 563 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 RGMAQ96B86 450 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 ZNF354BQ96LW1 612 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 SIGLEC12Q96PQ1 595 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 HBEGFQ99075 208 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 MRPL57Q9BQC6 102 aaKnown RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 CCDC77Q9BR77 488 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 ALOXE3Q9BYJ1 711 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 DEFB126Q9BYW3 111 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 PITHD1Q9GZP4 211 aaPredicted RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 TSPAN10Q9H1Z9 355 aaPredicted RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 MRPL46Q9H2W6 279 aaKnown RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 C12orf65Q9H3J6 166 aaKnown RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 AGPAT4Q9NRZ5 378 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 ABI3Q9P2A4 366 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 PSMC3IPQ9P2W1 217 aaPredicted RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 ZNF180Q9UJW8 692 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 PCTPQ9UKL6 214 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 DAPP1Q9UN19 280 aa11.23□□□□□ -0.61
TPM1-216ENST00000558910 MRPS33Q9Y291 106 aaKnown RBP11.23□□□□□ -0.61
TPM1-216ENST00000558910 TRAV17A0A0B4J275 112 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 A0A1B0GTL3 188 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 TCRBV16S1A1N1A0A5B0 115 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 A1L4Q6 167 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 OR5H15A6NDH6 313 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 ANKUB1A6NFN9 424 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 POM121CA8CG34 1229 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 A8MT66 165 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 PCDH17O14917 1159 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 KLK8O60259 260 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 SEMA7AO75326 666 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 EEDO75530 441 aaKnown RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 SUPT7LO94864 414 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 SVILO95425 2214 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 KRT15P19012 456 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 TAC1P20366 129 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 HIST1H1TP22492 207 aaPredicted RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 HPDP32754 393 aaPredicted RBP11.22□□□□□ -0.61
TPM1-216ENST00000558910 CD96P40200 585 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 CASP2P42575 452 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 AP2B1P63010 937 aa11.22□□□□□ -0.61
TPM1-216ENST00000558910 PHEXP78562 749 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms