RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 POLQO75417 2590 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 A0A1W2PS29 197 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 FCHO1O14526 889 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 FGF17O60258 216 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 SUPT3HO75486 399 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 PDE9AO76083 593 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ETHE1O95571 254 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 TGFB1P01137 390 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 MYBL2P10244 700 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ABOP16442 354 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 POU3F2P20265 443 aaPredicted RBP12.58□□□□□ -0.4
VPS18-203ENST00000558855 ATP5A1P25705 553 aaKnown RBP12.58□□□□□ -0.4
VPS18-203ENST00000558855 MAGEA4P43358 317 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 HK2P52789 917 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ATP6V0D1P61421 351 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 SLC7A5Q01650 507 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 IRF8Q02556 426 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 CALCOCO2Q13137 446 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.58□□□□□ -0.4
VPS18-203ENST00000558855 CD163Q86VB7 1156 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 OR4N5Q8IXE1 308 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ZNF595Q8IYB9 648 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 LAS2Q8IYD9 372 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 TCAIMQ8N3R3 496 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ACOT4Q8N9L9 421 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ZFP62Q8NB50 900 aaPredicted RBP12.58□□□□□ -0.4
VPS18-203ENST00000558855 FAM98AQ8NCA5 519 aaKnown RBP12.58□□□□□ -0.4
VPS18-203ENST00000558855 ARMC2Q8NEN0 867 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 C16orf52Q8NHV5 167 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 UBTD2Q8WUN7 234 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 TSPAN17Q96FV3 270 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 RASL10BQ96S79 203 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 EFCAB11Q9BUY7 163 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 ZNF717Q9BY31 904 aaPredicted RBP12.58□□□□□ -0.4
VPS18-203ENST00000558855 ALOXE3Q9BYJ1 711 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 OR51B5Q9H339 312 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 PLSCR2Q9NRY7 297 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 RNF14Q9UBS8 474 aa12.58□□□□□ -0.4
VPS18-203ENST00000558855 KLF13Q9Y2Y9 288 aaPredicted RBP12.58□□□□□ -0.4
VPS18-203ENST00000558855 TEP1Q99973 2627 aaKnown RBP12.58□□□□□ -0.4
VPS18-203ENST00000558855 FAM166BA8MTA8 275 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 TFECO14948 347 aaPredicted RBP12.57□□□□□ -0.4
VPS18-203ENST00000558855 CDC40O60508 579 aaKnown RBP eCLIP12.57□□□□□ -0.4
VPS18-203ENST00000558855 CTNSO60931 367 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 ESRRAP11474 423 aaPredicted RBP12.57□□□□□ -0.4
VPS18-203ENST00000558855 CASP2P42575 452 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 SSR4P51571 173 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 HNRNPH2P55795 449 aaKnown RBP12.57□□□□□ -0.4
VPS18-203ENST00000558855 ELAVL1Q15717 326 aaKnown RBP12.57□□□□□ -0.4
VPS18-203ENST00000558855 ZNF750Q32MQ0 723 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 CDKL4Q5MAI5 379 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 IL20RBQ6UXL0 311 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 SYT10Q6XYQ8 523 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 CYS1Q717R9 158 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 LRRC70Q7Z2Q7 622 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 HORMAD2Q8N7B1 307 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 PSD4Q8NDX1 1056 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 OR7G3Q8NG95 312 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 FAM57AQ8TBR7 257 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 ZNF721Q8TF20 911 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 MRRFQ96E11 262 aaKnown RBP12.57□□□□□ -0.4
VPS18-203ENST00000558855 OR8D2Q9GZM6 311 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 PITHD1Q9GZP4 211 aaPredicted RBP12.57□□□□□ -0.4
VPS18-203ENST00000558855 DEFB127Q9H1M4 99 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 ZDHHC18Q9NUE0 388 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 NUDT4Q9NZJ9 180 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 MYOTQ9UBF9 498 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 TNFRSF10DQ9UBN6 386 aa12.57□□□□□ -0.4
VPS18-203ENST00000558855 PLPP1O14494 284 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 KERAO60938 352 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 ZFAND5O76080 213 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 SCELO95171 688 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 CLDN14O95500 239 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 IFNA16P05015 189 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 TPOP07202 933 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 CELA3AP09093 270 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 PCNAP12004 261 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 HIST1H1TP22492 207 aaPredicted RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 GSTM2P28161 218 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 SPRP35270 261 aaPredicted RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 DDX39BQ13838 428 aaKnown RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 TBCCQ15814 346 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 C18orf63Q68DL7 685 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 MTFR2Q6P444 385 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 XKRXQ6PP77 449 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 LYPD8Q6UX82 237 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 C9orf40Q8IXQ3 194 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 PLD6Q8N2A8 252 aaKnown RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 TMEM156Q8N614 296 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 ACBD4Q8NC06 268 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 OR2M7Q8NG81 312 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 SLC2A12Q8TD20 617 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 CDKL2Q92772 493 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 TMEM125Q96AQ2 219 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 MTFMTQ96DP5 389 aaKnown RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 SEC16BQ96JE7 1060 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms