RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 TCAF1Q9Y4C2 921 aa10.84□□□□□ -0.67
SMAD3-206ENST00000558739 A0A096LNT2 108 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 A0A0G2JN53 185 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 OR1F1O43749 312 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 NRDCO43847 1150 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 NDUFS7O75251 213 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 NDUFS3O75489 264 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 TRAPPC6AO75865 159 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 TNFSF13O75888 250 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ARNTP27540 789 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 SLC1A1P43005 524 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 CRADDP78560 199 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ZBED6P86452 979 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 BMPR2Q13873 1038 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 PARP6Q2NL67 630 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF791Q3KP31 576 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-206ENST00000558739 EIPR1Q53HC9 387 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 LUZP1Q86V48 1076 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 PAQR8Q8TEZ7 354 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 PTPMT1Q8WUK0 201 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ALKBH8Q96BT7 664 aaKnown RBP10.83□□□□□ -0.68
SMAD3-206ENST00000558739 LRRC45Q96CN5 670 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 MRFAP1L1Q96HT8 127 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 PPP1R2P1Q96PQ5 205 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 TUBA1CQ9BQE3 449 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 G6PC3Q9BUM1 346 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ADAP2Q9NPF8 381 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF226Q9NYT6 803 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ANAPC5Q9UJX4 755 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF148Q9UQR1 794 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 CRYL1Q9Y2S2 319 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 MMACHCQ9Y4U1 282 aa10.83□□□□□ -0.68
SMAD3-206ENST00000558739 CHCHD2Q9Y6H1 151 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-206ENST00000558739 AVILO75366 819 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 ACSL3O95573 720 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 EGR1P18146 543 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 PPARGP37231 505 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-206ENST00000558739 CDKN1AP38936 164 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 SKIV2L2P42285 1042 aaKnown RBP10.82□□□□□ -0.68
SMAD3-206ENST00000558739 CDH17Q12864 832 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 SLC13A2Q13183 592 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 P3H1Q32P28 736 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 UBAP2Q5T6F2 1119 aaKnown RBP10.82□□□□□ -0.68
SMAD3-206ENST00000558739 SLC22A10Q63ZE4 541 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 BHLHB9Q6PI77 547 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 OPN5Q6U736 354 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF704Q6ZNC4 412 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-206ENST00000558739 DNM1P46Q6ZS02 220 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 SYDE1Q6ZW31 735 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-206ENST00000558739 PIWIL4Q7Z3Z4 852 aaKnown RBP10.82□□□□□ -0.68
SMAD3-206ENST00000558739 C17orf64Q86WR6 236 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 PM20D2Q8IYS1 436 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 RCOR2Q8IZ40 523 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 PRELID2Q8N945 189 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 FAM13CQ8NE31 585 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 OR8K1Q8NGG5 319 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 ASB11Q8WXH4 323 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 NTNG2Q96CW9 530 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 C1orf159Q96HA4 380 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 CSF3RQ99062 836 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 ANGPTL4Q9BY76 406 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 ADAM19Q9H013 955 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 CHRAC1Q9NRG0 131 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 PSD3Q9NYI0 1048 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 PACSIN3Q9UKS6 424 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 CAPN11Q9UMQ6 739 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 LAMP3Q9UQV4 416 aa10.82□□□□□ -0.68
SMAD3-206ENST00000558739 EXPH5Q8NEV8 1989 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 GFYI3L273 518 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 SMNDC1O75940 238 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 SERPINC1P01008 464 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 IGHV4-39P01824 125 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 CHRM3P20309 590 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 HRH2P25021 359 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 UGT2B10P36537 528 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 CLCN7P51798 805 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 CCZ1BP86790 482 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 CCZ1P86791 482 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 OCRLQ01968 901 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 PWP1Q13610 501 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 RUNX2Q13950 521 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 ELAVL1Q15717 326 aaKnown RBP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 FNDC7Q5VTL7 733 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 ANKRD34AQ69YU3 496 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 VWA1Q6PCB0 445 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 ZNF474Q6S9Z5 364 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 BTLAQ7Z6A9 289 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 KIAA1328Q86T90 577 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 LRRC6Q86X45 466 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 RHOT2Q8IXI1 618 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 C9orf40Q8IXQ3 194 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 OTUD6BQ8N6M0 293 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 SLC2A12Q8TD20 617 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 SPACA9Q96E40 222 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-206ENST00000558739 FAM111AQ96PZ2 611 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 DOHHQ9BU89 302 aa10.81□□□□□ -0.68
SMAD3-206ENST00000558739 SLCO5A1Q9H2Y9 848 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms