RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 ABCB7O75027 752 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 ERAL1O75616 437 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 INMTO95050 263 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 VIPP01282 170 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 C9P02748 559 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 PEBP1P30086 187 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 MAP2K4P45985 399 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 PRKAG1P54619 331 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 DSTNP60981 165 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 TEAD4Q15561 434 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 DUSP7Q16829 419 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 RBM48Q5RL73 367 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 C10orf62Q5T681 223 aaPredicted RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 CCDC81Q6ZN84 652 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 NUDT13Q86X67 352 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 OR5D16Q8NGK9 328 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 SIPA1Q96FS4 1042 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 FEVQ99581 238 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 DPH7Q9BTV6 452 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 ANKRA2Q9H9E1 313 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 MRPS30Q9NP92 439 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 ERVK-18Q9QC07 812 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 SLC17A4Q9Y2C5 497 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 LYVE1Q9Y5Y7 322 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 GON4LQ3T8J9 2241 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 ISM1B1AKI9 464 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 CACNB4O00305 520 aaPredicted RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 SLC16A6O15403 523 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 ERI3O43414 337 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 CXCR2P25025 360 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 PKLRP30613 574 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 RPL3P39023 403 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 EEF1A2Q05639 463 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 SKIV2LQ15477 1246 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 RPE65Q16518 533 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 EXOC3L2Q2M3D2 409 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 IFI44LQ53G44 452 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 TRIM73Q86UV7 250 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 ERI1Q8IV48 349 aaKnown RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 RAB42Q8N4Z0 105 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 SLC5A8Q8N695 610 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 OR1E3Q8WZA6 343 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 RGMAQ96B86 450 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 RSPO3Q9BXY4 272 aaPredicted RBP10.04□□□□□ -0.8
TPM1-210ENST00000558264 GABARAPL1Q9H0R8 117 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 AMBNQ9NP70 447 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 SPATA7Q9P0W8 599 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 FBXW2Q9UKT8 454 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 SPEGQ15772 3267 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 VCANP13611 3396 aa10.04□□□□□ -0.8
TPM1-210ENST00000558264 PRSS38A1L453 326 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 CPNE6O95741 557 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 ITGAMP11215 1152 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 UQCRC2P22695 453 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 RPP38P78345 283 aaKnown RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 DYNC1I2Q13409 638 aaKnown RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 ADAM15Q13444 863 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 BIRC2Q13490 618 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 LRRC32Q14392 662 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 HEPACAMQ14CZ8 416 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 UAP1L1Q3KQV9 507 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 NDUFAF5Q5TEU4 345 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 KIAA1614Q5VZ46 1190 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 OR4C11Q6IEV9 310 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 TMEM184AQ6ZMB5 413 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 IKBIPQ70UQ0 350 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 PAGE2Q7Z2X7 111 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 SFTPA2Q8IWL1 248 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 NLGN4XQ8N0W4 816 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 CREB3L4Q8TEY5 395 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 NIPSNAP1Q9BPW8 284 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 SPATA9Q9BWV2 254 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 YTHDF1Q9BYJ9 559 aaKnown RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 DNMT3AQ9Y6K1 912 aaPredicted RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 PIAS3Q9Y6X2 628 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 NINQ8N4C6 2090 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 TRBC2A0A5B9 178 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 LRIT2A6NDA9 550 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 BTN3A3O00478 584 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 PCDH17O14917 1159 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 KRT75O95678 551 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 CDK4P11802 303 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 ZNF182P17025 639 aaPredicted RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 GPC1P35052 558 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 HSD17B2P37059 387 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 TNFRSF4P43489 277 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 DMPKQ09013 629 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 NPRL3Q12980 569 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 RFX4Q33E94 735 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 KIAA1161Q6NSJ0 714 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 PIWIL3Q7Z3Z3 882 aaKnown RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 C6orf120Q7Z4R8 191 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 OR10G2Q8NGC3 310 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 OR13F1Q8NGS4 319 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 VANGL1Q8TAA9 524 aaPredicted RBP10.03□□□□□ -0.8
TPM1-210ENST00000558264 SLC38A5Q8WUX1 472 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 MTERF3Q96E29 417 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 TMEM19Q96HH6 336 aa10.03□□□□□ -0.8
TPM1-210ENST00000558264 NODALQ96S42 347 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms