RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 IGHG3P01860 377 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 RNF4P78317 190 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 PDIA2Q13087 525 aaKnown RBP14.78□□□□□ -0.04
SCFD1-224ENST00000557713 DOC2AQ14183 400 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 RCN2Q14257 317 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 FASTKD3Q14CZ7 662 aaKnown RBP14.78□□□□□ -0.04
SCFD1-224ENST00000557713 CDKL4Q5MAI5 379 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 NDUFAF5Q5TEU4 345 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 RTL4Q6ZR62 310 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 UBE3DQ7Z6J8 389 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 SLC22A16Q86VW1 577 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 TCAIMQ8N3R3 496 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 SPATA6LQ8N4H0 392 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 OR8K3Q8NH51 312 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 OR14A16Q8NHC5 309 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 SREK1Q8WXA9 508 aaKnown RBP14.78□□□□□ -0.04
SCFD1-224ENST00000557713 KIAA1191Q96A73 305 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 SCYL1Q96KG9 808 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 FAM173AQ9BQD7 235 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 SMYD2Q9NRG4 433 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 DNAJC11Q9NVH1 559 aa14.78□□□□□ -0.04
SCFD1-224ENST00000557713 MTO1Q9Y2Z2 717 aaKnown RBP14.78□□□□□ -0.04
SCFD1-224ENST00000557713 C2CD3Q4AC94 2353 aa14.77□□□□□ -0.04
SCFD1-224ENST00000557713 A0A1B0GVC2 190 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 OR14I1A6ND48 311 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 G3V3Y1 287 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 SEC31AO94979 1220 aaKnown RBP14.77□□□□□ -0.05
SCFD1-224ENST00000557713 TCP1P17987 556 aaKnown RBP14.77□□□□□ -0.05
SCFD1-224ENST00000557713 CD22P20273 847 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 ACVR2AP27037 513 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 DR1Q01658 176 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 POU4F1Q01851 419 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 STX4Q12846 297 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 HYAL4Q2M3T9 481 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 FBXO48Q5FWF7 155 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 SULT1C3Q6IMI6 304 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 KLHL7Q8IXQ5 586 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 TMEM251Q8N6I4 163 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 OR5M9Q8NGP3 310 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 OR5M3Q8NGP4 307 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 ESAMQ96AP7 390 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 PTCD3Q96EY7 689 aaKnown RBP14.77□□□□□ -0.05
SCFD1-224ENST00000557713 OR8D2Q9GZM6 311 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 CNOT10Q9H9A5 744 aaKnown RBP14.77□□□□□ -0.05
SCFD1-224ENST00000557713 COPS7BQ9H9Q2 264 aaPredicted RBP14.77□□□□□ -0.05
SCFD1-224ENST00000557713 IL1RL2Q9HB29 575 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 LYRM4Q9HD34 91 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 NSMCE4AQ9NXX6 385 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 KCNN3Q9UGI6 736 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 LIPGQ9Y5X9 500 aa14.77□□□□□ -0.05
SCFD1-224ENST00000557713 SETD2Q9BYW2 2564 aaPredicted RBP14.76□□□□□ -0.05
SCFD1-224ENST00000557713 C17orf105B2RV13 164 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 BCKDKO14874 412 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 ZSCAN12O43309 604 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 KLK8O60259 260 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 LDB3O75112 727 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 STK16O75716 305 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 PIAS1O75925 651 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 CCDC166P0CW27 439 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 EPORP19235 508 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 TNNI3P19429 210 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 MAGEA5P43359 124 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 KCNC1P48547 511 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 HSPA7P48741 367 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 TGM3Q08188 693 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 FOXO1Q12778 655 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 ILF2Q12905 390 aaKnown RBP14.76□□□□□ -0.05
SCFD1-224ENST00000557713 SERTAD2Q14140 314 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 RTL6Q6ICC9 239 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 OPN5Q6U736 354 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 ZNF793Q6ZN11 406 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 GK5Q6ZS86 529 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 TRILQ7L0X0 811 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 GPSM1Q86YR5 675 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 CREG2Q8IUH2 290 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 FAM109AQ8N4B1 249 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 GOLM1Q8NBJ4 401 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 OR5L2Q8NGL0 311 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 SLC2A12Q8TD20 617 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 SGCZQ96LD1 299 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 KCNC2Q96PR1 638 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 SMC6Q96SB8 1091 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 MAPKAP1Q9BPZ7 522 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 TTYH2Q9BSA4 534 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 EFCAB11Q9BUY7 163 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 CAB39LQ9H9S4 337 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 WWOXQ9NZC7 414 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 PTBP2Q9UKA9 531 aaKnown RBP14.76□□□□□ -0.05
SCFD1-224ENST00000557713 FAM215AQ9Y5M1 114 aa14.76□□□□□ -0.05
SCFD1-224ENST00000557713 NF1P21359 2839 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ETHE1O95571 254 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 GLI4P10075 376 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 CD1DP15813 335 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 ATP5A1P25705 553 aaKnown RBP14.75□□□□□ -0.05
SCFD1-224ENST00000557713 CASP2P42575 452 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 SLC12A2P55011 1212 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 LAPTM5Q13571 262 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 E2F2Q14209 437 aa14.75□□□□□ -0.05
SCFD1-224ENST00000557713 OR4D1Q15615 310 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms