RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 H0YCG3 227 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CLDN3O15551 220 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 B4GAT1O43505 415 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 KRT86O43790 486 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 VPS26AO75436 327 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 SPAG6O75602 509 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 EML2O95834 649 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 FAM157CP0CG43 387 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CT45A8P0DMV1 189 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CT45A9P0DMV2 189 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 PRG2P13727 222 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 PAICSP22234 425 aaKnown RBP3.83□□□□□ -1.8
PNN-206ENST00000557680 GLRA1P23415 457 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 PPP2R1AP30153 589 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 STIP1P31948 543 aaKnown RBP3.83□□□□□ -1.8
PNN-206ENST00000557680 SOX3P41225 446 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CDKN2AP42771 156 aaKnown RBP3.83□□□□□ -1.8
PNN-206ENST00000557680 HOXA1P49639 335 aaPredicted RBP3.83□□□□□ -1.8
PNN-206ENST00000557680 CCR4P51679 360 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 DVL1P1P54792 670 aaPredicted RBP3.83□□□□□ -1.8
PNN-206ENST00000557680 GEMP55040 296 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 BACE1P56817 501 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 ACTR1AP61163 376 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 SSTP61278 116 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CSNK2BP67870 215 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 MYL7Q01449 175 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CNTN1Q12860 1018 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 SNTB2Q13425 540 aaKnown RBP3.83□□□□□ -1.8
PNN-206ENST00000557680 KRT81Q14533 505 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 OR1C1Q15619 314 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 ZNF74Q16587 644 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CT45A2Q5DJT8 189 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 C9orf50Q5SZB4 431 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 LCN1P1Q5VSP4 162 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 SLC25A47Q6Q0C1 308 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 CASC1Q6TDU7 716 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 ARSKQ6UWY0 536 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 ITIH5Q86UX2 942 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 SLC22A16Q86VW1 577 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 LEMD2Q8NC56 503 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 KLHDC9Q8NEP7 349 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 OR2T11Q8NH01 316 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 OR2T3Q8NH03 318 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 SECTM1Q8WVN6 248 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 PHYHIPQ92561 330 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 THRSPQ92748 146 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 PCED1BQ96HM7 432 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 C2orf48Q96LS8 159 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 TESK2Q96S53 571 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 LPAR4Q99677 370 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 MTMR12Q9C0I1 747 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 HIPK2Q9H2X6 1198 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 FNDC4Q9H6D8 234 aaPredicted RBP3.83□□□□□ -1.8
PNN-206ENST00000557680 HPS4Q9NQG7 708 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 HOMER3Q9NSC5 361 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 ZFP57Q9NU63 452 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 RNF186Q9NXI6 227 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 FLRT3Q9NZU0 649 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 HACD3Q9P035 362 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 POLKQ9UBT6 870 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 MGAT4BQ9UQ53 548 aa3.83□□□□□ -1.8
PNN-206ENST00000557680 SMCHD1A6NHR9 2005 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 TRIP12Q14669 1992 aaPredicted RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 FGD5Q6ZNL6 1462 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 PARD3Q8TEW0 1356 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 TLX2O43763 284 aaPredicted RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 EXTL3O43909 919 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CIDEAO60543 219 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CYTIPO60759 359 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 MBD3O95983 291 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 GOT2P00505 430 aaKnown RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 HPRP00739 348 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 PCCBP05166 539 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 HMBSP08397 361 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CLUP10909 449 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 HNRNPA2B1P22626 353 aaKnown RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 FCGR2BP31994 310 aaPredicted RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 SLC1A3P43003 542 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 SLC6A8P48029 635 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 DCDC1P59894 354 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 MYBPC1Q00872 1141 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CDR2Q01850 454 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CHIT1Q13231 466 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.85e-11■■■□□ 17.5
PNN-206ENST00000557680 SNX1Q13596 522 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 HNRNPDQ14103 355 aaKnown RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 GRB14Q14449 540 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 C3AR1Q16581 482 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CLPPQ16740 277 aaPredicted RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 ZSWIM7Q19AV6 140 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 NADK2Q4G0N4 442 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CEP55Q53EZ4 464 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 PDLIM3Q53GG5 364 aaPredicted RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 RBMS3Q6XE24 437 aaKnown RBP3.82□□□□□ -1.8
PNN-206ENST00000557680 CDHR3Q6ZTQ4 885 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CERS5Q8N5B7 392 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 CCDC197Q8NCU1 140 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 TRIM58Q8NG06 486 aa3.82□□□□□ -1.8
PNN-206ENST00000557680 OR52M1Q8NGK5 317 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms