RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PTPMT1Q8WUK0 201 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 PBKQ96KB5 322 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CAPZA3Q96KX2 299 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 F2RL3Q96RI0 385 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 TMEM79Q9BSE2 394 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 TMUB1Q9BVT8 246 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 ALOXE3Q9BYJ1 711 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 GSX1Q9H4S2 264 aaPredicted RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CLK4Q9HAZ1 481 aaKnown RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 ZNF358Q9NW07 568 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 DNAJB12Q9NXW2 375 aaKnown RBP13.04□□□□□ -0.32
SLIRP-210ENST00000557431 SPRR3Q9UBC9 169 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 KCNN3Q9UGI6 736 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 PLEKHA6Q9Y2H5 1048 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 OARD1Q9Y530 152 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CLCA3PQ9Y6N3 262 aa13.04□□□□□ -0.32
SLIRP-210ENST00000557431 CYR61O00622 381 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 CLDN4O14493 209 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 TAPBPO15533 448 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 ETHE1O95571 254 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 TTC4O95801 387 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 HOXB4P17483 251 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 TNNI3P19429 210 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 CD22P20273 847 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 ZFP36L2P47974 494 aaKnown RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 SLC6A12P48065 614 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 FOXO1Q12778 655 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 FASTKD3Q14CZ7 662 aaKnown RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 ELAVL1Q15717 326 aaKnown RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 PRAMEF20Q5VT98 475 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 HSDL2Q6YN16 418 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 ZNF793Q6ZN11 406 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 GALNT7Q86SF2 657 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 SLC22A16Q86VW1 577 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 MMP21Q8N119 569 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 SLC35F6Q8N357 371 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 TMEM132CQ8N3T6 1108 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 FAM109AQ8N4B1 249 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 SLC2A12Q8TD20 617 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 GRK7Q8WTQ7 553 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 RHBDF1Q96CC6 855 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 PDLIM5Q96HC4 596 aaKnown RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 RUNDC3BQ96NL0 473 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 OSBPL9Q96SU4 736 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 MAPKAP1Q9BPZ7 522 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 NPLQ9BXD5 320 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 REXO4Q9GZR2 422 aaKnown RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 LDAHQ9H6V9 325 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 EXO5Q9H790 373 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 COPS7BQ9H9Q2 264 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 DAPP1Q9UN19 280 aa13.03□□□□□ -0.32
SLIRP-210ENST00000557431 HRNRQ86YZ3 2850 aaPredicted RBP13.03□□□□□ -0.32
SLIRP-210ENST00000557431 ANKDD1BA6NHY2 528 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 C17orf105B2RV13 164 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 HRKO00198 91 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 CLGNO14967 610 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 H2AFYO75367 372 aaKnown RBP13.02□□□□□ -0.33
SLIRP-210ENST00000557431 IGHG3P01860 377 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 RFPL3SP0C7P2 107 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 CNR1P21554 472 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 IVDP26440 423 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 HSPA7P48741 367 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 FNTAP49354 379 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 MAN2A2P49641 1150 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 RNF4P78317 190 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 ASPHQ12797 758 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 STX4Q12846 297 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 C1orf185Q5T7R7 199 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 TRIM40Q6P9F5 258 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 ABHD17CQ6PCB6 329 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 DGAT2L6Q6ZPD8 337 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 RTL4Q6ZR62 310 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 GK5Q6ZS86 529 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 CAPN12Q6ZSI9 719 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 ZC3HC1Q86WB0 502 aaKnown RBP13.02□□□□□ -0.33
SLIRP-210ENST00000557431 ZNF595Q8IYB9 648 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 CLYBLQ8N0X4 340 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 RNF175Q8N4F7 328 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 OR2L5Q8NG80 312 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 GABPB2Q8TAK5 448 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-210ENST00000557431 EXT2Q93063 718 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 FAM173AQ9BQD7 235 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 SORBS1Q9BX66 1292 aaKnown RBP13.02□□□□□ -0.33
SLIRP-210ENST00000557431 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.33
SLIRP-210ENST00000557431 SLC6A15Q9H2J7 730 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 CAB39LQ9H9S4 337 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 PRM3Q9NNZ6 103 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 SACM1LQ9NTJ5 587 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 WWOXQ9NZC7 414 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 CTNNAL1Q9UBT7 734 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 ACAD8Q9UKU7 415 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 ZNF490Q9ULM2 529 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-210ENST00000557431 MRPS33Q9Y291 106 aaKnown RBP13.02□□□□□ -0.33
SLIRP-210ENST00000557431 ATG4BQ9Y4P1 393 aa13.02□□□□□ -0.33
SLIRP-210ENST00000557431 NF1P21359 2839 aa13.01□□□□□ -0.33
SLIRP-210ENST00000557431 FIGNL2A6NMB9 653 aa13.01□□□□□ -0.33
SLIRP-210ENST00000557431 SAP18O00422 153 aaKnown RBP13.01□□□□□ -0.33
SLIRP-210ENST00000557431 BCKDKO14874 412 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms