RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	MEX3B	Q6ZN04	569 aa	Known RBP	10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ZNF793	Q6ZN11	406 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CEP128	Q6ZU80	1094 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CLNK	Q7Z7G1	428 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ADAMTSL2	Q86TH1	951 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ZNF595	Q8IYB9	648 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PSD4	Q8NDX1	1056 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	OR2L5	Q8NG80	312 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	OR2M7	Q8NG81	312 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	LILRB4	Q8NHJ6	448 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ZNF775	Q96BV0	537 aa	Predicted RBP	10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	WDR34	Q96EX3	536 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	F2RL3	Q96RI0	385 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	EGFL8	Q99944	293 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	DEFB127	Q9H1M4	99 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	RHOJ	Q9H4E5	214 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ZDHHC11	Q9H8X9	412 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CAB39L	Q9H9S4	337 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	MCCC2	Q9HCC0	563 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PGPEP1	Q9NXJ5	209 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	MYOT	Q9UBF9	498 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CTNNAL1	Q9UBT7	734 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ITGB1BP2	Q9UKP3	347 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	DAPP1	Q9UN19	280 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	RNF6	Q9Y252	685 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	YARS2	Q9Y2Z4	477 aa	Known RBP	10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ACAN	P16112	2415 aa		10.36	□□□□□ -0.75
HNRNPC-231	ENST00000557336	NKX2-6	A6NCS4	301 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PABPN1L	A6NDY0	278 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	NCF1B	A6NI72	391 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	NCF1C	A8MVU1	366 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336		G3V3Y1	287 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	WWP2	O00308	870 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CDC40	O60508	579 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CTNS	O60931	367 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ZFAND5	O76080	213 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	NCF1	P14598	390 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	TCP1	P17987	556 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SOX3	P41225	446 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	RPL21	P46778	160 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	HSPA7	P48741	367 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	HK2	P52789	917 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ARL4C	P56559	192 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	MRPS25	P82663	173 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	DR1	Q01658	176 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	FOXO1	Q12778	655 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SLC13A2	Q13183	592 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ELAVL1	Q15717	326 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ZNF750	Q32MQ0	723 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	IL20RB	Q6UXL0	311 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SPNS3	Q6ZMD2	512 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CCDC71	Q8IV32	467 aa	Predicted RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	TMEM156	Q8N614	296 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CA5BP1	Q8WTZ4	195 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	VPS39	Q96JC1	886 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SEC16B	Q96JE7	1060 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	FAR2	Q96K12	515 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	RASL10B	Q96S79	203 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	TRIM31	Q9BZY9	425 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	DERL2	Q9GZP9	239 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	REXO4	Q9GZR2	422 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	EHD1	Q9H4M9	534 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	POPDC3	Q9HBV1	291 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ADAP2	Q9NPF8	381 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	GPRC5B	Q9NZH0	403 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	VTI1B	Q9UEU0	232 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PTBP2	Q9UKA9	531 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	LIPG	Q9Y5X9	500 aa		10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.35	□□□□□ -0.75
HNRNPC-231	ENST00000557336	FAM166B	A8MTA8	275 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	RTCA	O00442	366 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PHGDH	O43175	533 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	B3GALT2	O43825	422 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	H2AFY	O75367	372 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ETHE1	O95571	254 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	TUBB4A	P04350	444 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CELA3A	P09093	270 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CD1D	P15813	335 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CAPN3	P20807	821 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	GSTM2	P28161	218 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SSTR1	P30872	391 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	MTTP	P55157	894 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	NUP107	P57740	925 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PPIA	P62937	165 aa	Known RBP	10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PMPCA	Q10713	525 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	GXYLT1	Q4G148	440 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	RTL6	Q6ICC9	239 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ARHGAP11A	Q6P4F7	1023 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	DGAT2L6	Q6ZPD8	337 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	TTL	Q8NG68	377 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	CCT6B	Q92526	530 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ANKRD9	Q96BM1	317 aa	Predicted RBP	10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SCYL1	Q96KG9	808 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	UBXN10	Q96LJ8	280 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	SERINC2	Q96SA4	455 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	MAPKAP1	Q9BPZ7	522 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	ALOXE3	Q9BYJ1	711 aa		10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.34	□□□□□ -0.75
HNRNPC-231	ENST00000557336	TIMMDC1	Q9NPL8	285 aa		10.34	□□□□□ -0.75

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