RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 A0A0G2JN53 185 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CTAGE9A4FU28 777 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TRIM64A6NGJ6 449 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TRIM64BA6NI03 449 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TBX6O95947 436 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-221ENST00000557293 P04436 131 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 C8GP07360 202 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TRPC1P48995 793 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 RAB38P57729 211 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CCZ1BP86790 482 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-221ENST00000557293 SORDQ00796 357 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CRYZQ08257 329 aaKnown RBP11.54□□□□□ -0.56
PSEN1-221ENST00000557293 BMPR2Q13873 1038 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 ELAVL1Q15717 326 aaKnown RBP11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TOR1AIP1Q5JTV8 583 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 SLC22A10Q63ZE4 541 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 PAQR3Q6TCH7 311 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 PRSS57Q6UWY2 283 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CAPN12Q6ZSI9 719 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CLNKQ7Z7G1 428 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CAND1Q86VP6 1230 aaKnown RBP11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TMEM132CQ8N3T6 1108 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 CCDC89Q8N998 374 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 MORN4Q8NDC4 146 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TRPV3Q8NET8 790 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 OR8K3Q8NH51 312 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 PAQR8Q8TEZ7 354 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 ZNF592Q92610 1267 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 LRRC46Q96FV0 321 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 TIMP4Q99727 224 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 BDH2Q9BUT1 245 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 VTI1BQ9UEU0 232 aa11.54□□□□□ -0.56
PSEN1-221ENST00000557293 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 URADA6NGE7 173 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 CTNSO60931 367 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 CRLF1O75462 422 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 ETHE1O95571 254 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 TPSB2P20231 275 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 HNRNPH1P31943 449 aaKnown RBP11.53□□□□□ -0.56
PSEN1-221ENST00000557293 SLC1A2P43004 574 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 BASP1P80723 227 aaKnown RBP11.53□□□□□ -0.56
PSEN1-221ENST00000557293 CDK16Q00536 496 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 SP140Q13342 867 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 DHX34Q14147 1143 aaKnown RBP11.53□□□□□ -0.56
PSEN1-221ENST00000557293 CSHL1Q14406 222 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 TPSAB1Q15661 275 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 BBS9Q3SYG4 887 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 NSUN5P2Q63ZY6 315 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 OPN5Q6U736 354 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 LACC1Q8IV20 430 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 P3H2Q8IVL5 708 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 AGGF1Q8N302 714 aaeCLIP11.53□□□□□ -0.56
PSEN1-221ENST00000557293 SLC5A11Q8WWX8 675 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 FBXL8Q96CD0 374 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 NPLQ9BXD5 320 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-221ENST00000557293 ALOXE3Q9BYJ1 711 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 ZFP64Q9NPA5 681 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 QPCTLQ9NXS2 382 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 FBXO5Q9UKT4 447 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 COMMD10Q9Y6G5 202 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 CLCA3PQ9Y6N3 262 aa11.53□□□□□ -0.56
PSEN1-221ENST00000557293 MBD3L4A6NDZ8 208 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-221ENST00000557293 MBD3L5A6NJ08 208 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-221ENST00000557293 SIAH2O43255 324 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 IL2RAP01589 272 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 GABRB3P28472 473 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 PGGT1BP53609 377 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 PPP2R2BQ00005 443 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 KRTAP1-1Q07627 177 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 ASPHQ12797 758 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 SLC13A2Q13183 592 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 DUSP8Q13202 625 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 RBBP5Q15291 538 aaKnown RBP11.52□□□□□ -0.57
PSEN1-221ENST00000557293 CCNG2Q16589 344 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 MPEG1Q2M385 716 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 ARMC3Q5W041 872 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 NXPE4Q6UWF7 544 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 PHC2Q8IXK0 858 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 ZNF595Q8IYB9 648 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 RASGEF1CQ8N431 466 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 TBC1D19Q8N5T2 526 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 FAM47BQ8NA70 645 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 PPP1R14CQ8TAE6 165 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 ZNF721Q8TF20 911 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 SMPDL3BQ92485 455 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 MS4A6EQ96DS6 147 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 TSNARE1Q96NA8 513 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 CSF3RQ99062 836 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 YIPF4Q9BSR8 244 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 TSGA10Q9BZW7 698 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 OR8D2Q9GZM6 311 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 PRDM14Q9GZV8 571 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 CCDC68Q9H2F9 335 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 PELI2Q9HAT8 420 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 IKZF3Q9UKT9 509 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 NPFFR2Q9Y5X5 522 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 NBEAL1Q6ZS30 2694 aa11.52□□□□□ -0.57
PSEN1-221ENST00000557293 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms