RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 FANCGO15287 622 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HRH2P25021 359 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HADHBP55084 474 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ABHD18Q0P651 414 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 SYT13Q7L8C5 426 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PRELID2Q8N945 189 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 M1APQ8TC57 530 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HAS2Q92819 552 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CORO2AQ92828 525 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ZUFSPQ96AP4 578 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 NIPSNAP3BQ9BS92 247 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 NUDT9Q9BW91 350 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ABCG8Q9H221 673 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 LIPT1Q9Y234 373 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 UNC13BO14795 1591 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 RFPL2O75678 378 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 GOT1P17174 413 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PGM5Q15124 567 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CLEC12AQ5QGZ9 265 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ATG9BQ674R7 924 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 USB1Q9BQ65 265 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PRODH2Q9UF12 536 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 RALGAPA1Q6GYQ0 2036 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CACNA1DQ01668 2161 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 MEIS2O14770 477 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 LGR5O75473 907 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PON2Q15165 354 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 AGAP6Q5VW22 663 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 AMZ2Q86W34 360 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF781Q8N8C0 355 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 BSCL2Q96G97 398 aaPredicted RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TXNDC15Q96J42 360 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 AGAP4Q96P64 663 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 MECRQ9BV79 373 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 SLC38A1Q9H2H9 487 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 GJB1P08034 283 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 DPEP1P16444 411 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 INHBEP58166 350 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 FITM2Q8N6M3 262 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 FAM122AQ96E09 287 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 RBMXL1Q96E39 390 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 FBXW2Q9UKT8 454 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TULP4Q9NRJ4 1543 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PCDH7O60245 1069 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PNPP00491 289 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 AK1P00568 194 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ALDOBP05062 364 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 S100A8P05109 93 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 SERPINA7P05543 415 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 C2orf15Q8WU43 125 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 GON7Q9BXV9 100 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 REEP4Q9H6H4 257 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 NT5DC2Q9H857 520 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TMEM248Q9NWD8 314 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CLIC1O00299 241 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TO15178 435 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 SYNGR4O95473 234 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HMGCS1Q01581 520 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 DUOXA1Q1HG43 343 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 FSTL4Q6MZW2 842 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HIST2H3AQ71DI3 136 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 MIR1-1HGQ9H1L0 117 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 NWD1Q149M9 1564 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 A0A0D9SG52 128 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TP73O15350 636 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TGOLN2O43493 480 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 RFPL3O75679 317 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TFP02787 698 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 RHOQP17081 205 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HNRNPA0Q13151 305 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 NTRK3Q16288 839 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 WDR45BQ5MNZ6 344 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 FAM46BQ96A09 425 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PSD2Q9BQI7 771 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TRPM6Q9BX84 2022 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 RNF13O43567 381 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 DLDP09622 509 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 FOXK1P85037 733 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ACDQ96AP0 544 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CNN2Q99439 309 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ULBP1Q9BZM6 244 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 RIOX1Q9H6W3 641 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CWH43Q9H720 699 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TCAF1Q9Y4C2 921 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 A0A1W2PRB8 838 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 NUDT19A8MXV4 375 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 J3QLW9 94 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 C1RP00736 705 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF19P17023 458 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 AKR1C4P17516 323 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 MPSTP25325 297 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 STK19P49842 368 aaPredicted RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 TGFB2P61812 414 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 KCNJ11Q14654 390 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 DRICH1Q6PGQ1 229 aaPredicted RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 BRAT1Q6PJG6 821 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 LMLNQ96KR4 655 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 GPRC5CQ9NQ84 441 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 DEC1Q9P2X7 70 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms