RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 HSD3B2P26439 372 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 HMOX2P30519 316 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 CASRP41180 1078 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 HNRNPFP52597 415 aaKnown RBP10.02□□□□□ -0.81
LINC00239-201ENST00000556973 STX4Q12846 297 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 BIKQ13323 160 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 SGO1Q5FBB7 561 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 CEP85LQ5SZL2 805 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 MRM1Q6IN84 353 aaKnown RBP10.02□□□□□ -0.81
LINC00239-201ENST00000556973 H3F3CQ6NXT2 135 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 LRIG3Q6UXM1 1119 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 FRMD7Q6ZUT3 714 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 PAGE2Q7Z2X7 111 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 NUDT13Q86X67 352 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 C10orf107Q8IVU9 208 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 HOMEZQ8IX15 550 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 RBMXL3Q8N7X1 1067 aaKnown RBP10.02□□□□□ -0.81
LINC00239-201ENST00000556973 TMEM52Q8NDY8 209 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 TCP10LQ8TDR4 215 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 AGAP11Q8TF27 550 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 TANKQ92844 425 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 CNDP1Q96KN2 507 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 CSF3RQ99062 836 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 SORBS1Q9BX66 1292 aaKnown RBP10.02□□□□□ -0.81
LINC00239-201ENST00000556973 ZNF717Q9BY31 904 aaPredicted RBP10.02□□□□□ -0.81
LINC00239-201ENST00000556973 EPS8L2Q9H6S3 715 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 ZBTB20Q9HC78 741 aaPredicted RBP10.02□□□□□ -0.81
LINC00239-201ENST00000556973 MMP25Q9NPA2 562 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 LYARQ9NX58 379 aaKnown RBP10.02□□□□□ -0.81
LINC00239-201ENST00000556973 TEKT2Q9UIF3 430 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 ASB4Q9Y574 426 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 BSNQ9UPA5 3926 aa10.02□□□□□ -0.81
LINC00239-201ENST00000556973 ARHGAP10A1A4S6 786 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SERTM1A2A2V5 107 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SAGE2PA6NJ88 616 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 A8MUI8 341 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 UBFD1O14562 309 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 CTIFO43310 598 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SLC28A2O43868 658 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 TYROBPO43914 113 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 EEDO75530 441 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 KLK1P06870 262 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 FAM58BPP0C7Q3 252 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 ITGAMP11215 1152 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 ALDH3A1P30838 453 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 BUD31P41223 144 aaPredicted RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SLC26A5P58743 744 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 CSTF3Q12996 717 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 MFAP5Q13361 173 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SERTAD2Q14140 314 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 PCLAFQ15004 111 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 TNFAIP8L3Q5GJ75 292 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 BEND6Q5SZJ8 279 aaPredicted RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 LINC00696Q6ZRV3 163 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 PRICKLE2Q7Z3G6 844 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 METTL4Q8N3J2 472 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 EFCAB3Q8N7B9 438 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 GBP7Q8N8V2 638 aaPredicted RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 BRIX1Q8TDN6 353 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 ELP5Q8TE02 316 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SREK1Q8WXA9 508 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 PNPLA2Q96AD5 504 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 PGM2Q96G03 612 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 ZNF354BQ96LW1 612 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 FAM111AQ96PZ2 611 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 TRMOQ9BU70 441 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 ALOXE3Q9BYJ1 711 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 RPF2Q9H7B2 306 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 KCNK13Q9HB14 408 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SSU72Q9NP77 194 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 STMN3Q9NZ72 180 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 PTGFRNQ9P2B2 879 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SLC17A7Q9P2U7 560 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 VPS29Q9UBQ0 182 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 VTI1BQ9UEU0 232 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SLC12A4Q9UP95 1085 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 B3GNT3Q9Y2A9 372 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 ATG4BQ9Y4P1 393 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 TIMM22Q9Y584 194 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 CPAMD8Q8IZJ3 1885 aa10.01□□□□□ -0.81
LINC00239-201ENST00000556973 SMG1Q96Q15 3661 aaKnown RBP10.01□□□□□ -0.81
LINC00239-201ENST00000556973 A8MUA0 341 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 TMPRSS11DO60235 418 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 LDB3O75112 727 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 GUCY1B2O75343 617 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 CRCPO75575 148 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 UQCRHP07919 91 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 CELA2AP08217 269 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 MYZAPP0CAP1 466 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 UROSP10746 265 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 CREB1P16220 341 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 PPP2R1BP30154 601 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 SOX11P35716 441 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 HNRNPH2P55795 449 aaKnown RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 TAS2R50P59544 299 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 TNFRSF17Q02223 184 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 TBL3Q12788 808 aaKnown RBP10□□□□□ -0.81
LINC00239-201ENST00000556973 TERF2Q15554 542 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 MEP1AQ16819 746 aa10□□□□□ -0.81
LINC00239-201ENST00000556973 PLEKHN1Q494U1 663 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms