RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 DUSP12Q9UNI6 340 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 FAM32AQ9Y421 112 aaKnown RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 POLR3HQ9Y535 204 aaPredicted RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 SPO11Q9Y5K1 396 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 NYNRINQ9P2P1 1898 aaKnown RBP5.87□□□□□ -1.47
CPSF2-205ENST00000556622 TECTAO75443 2155 aa5.87□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF638Q14966 1978 aaKnown RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TRAV19A0A0A6YYK7 116 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TMEM247A6NEH6 219 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 MGAT4DA6NG13 374 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CLDN24A6NM45 220 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SNTNA6NMZ2 147 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 HEPACAM2A8MVW5 462 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 MAGEB17A8MXT2 336 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TAF4O00268 1085 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SLC9A3R1O14745 358 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ANKRD28O15084 1053 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 MUSKO15146 869 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 RGS10O43665 173 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 NDUFS2O75306 463 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 KRT75O95678 551 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ANGPTL1O95841 491 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 GUCA1CO95843 209 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 PDGFBP01127 241 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 C9P02748 559 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 PIRTP0C851 137 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 BCKDHAP12694 445 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ATP1B2P14415 290 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 JUPP14923 745 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 GPX2P18283 190 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 HDCP19113 662 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 XPAP23025 273 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 HRH2P25021 359 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CD40LGP29965 261 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 OXTRP30559 389 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 GDI1P31150 447 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 RRM2P31350 389 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SLC6A4P31645 630 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 S100A5P33763 92 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 HSD17B2P37059 387 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 MAGEA2P43356 314 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 HSPA7P48741 367 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 AGTR2P50052 363 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ITGA1P56199 1179 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 DCDC1P59894 354 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 RPS24P62847 133 aaKnown RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SLC7A9P82251 487 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 IL5RAQ01344 420 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ACSM2AQ08AH3 577 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 FADDQ13158 208 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 NR1D2Q14995 579 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 KIAA0040Q15053 153 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 EIF4HQ15056 248 aaKnown RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ZNF284Q2VY69 593 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SETMARQ53H47 684 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 PITRM1Q5JRX3 1037 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TOR1AIP1Q5JTV8 583 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 MLIPQ5VWP3 458 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 KIAA1614Q5VZ46 1190 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 FRG2Q64ET8 278 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CPZQ66K79 652 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ACSM2BQ68CK6 577 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TXNDC8Q6A555 127 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CAPN13Q6MZZ7 669 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 KLHL35Q6PF15 583 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SPESP1Q6UW49 350 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CD300LDQ6UXZ3 194 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 GCNT7Q6ZNI0 430 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TPGS1Q6ZTW0 290 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 EIF3MQ7L2H7 374 aaKnown RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 PRSS48Q7RTY5 328 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 P2RY8Q86VZ1 359 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 KRT73Q86Y46 540 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 EPHX4Q8IUS5 362 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 EGFL6Q8IUX8 553 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SYT12Q8IV01 421 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 PLD3Q8IV08 490 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ZDHHC21Q8IVQ6 265 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 NRSN1Q8IZ57 195 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SPARTQ8N0X7 666 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 RAB42Q8N4Z0 105 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 DENND6BQ8NEG7 585 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 KBTBD8Q8NFY9 601 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 OR52B6Q8NGF0 335 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SH3RF2Q8TEC5 729 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CHPT1Q8WUD6 406 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CHTF18Q8WVB6 975 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SKA2Q8WVK7 121 aaPredicted RBP5.86□□□□□ -1.47
CPSF2-205ENST00000556622 PIH1D2Q8WWB5 315 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 SNX19Q92543 992 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 FBXL8Q96CD0 374 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 OTUB2Q96DC9 234 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 QRFPRQ96P65 431 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 FRG2BQ96QU4 278 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 ZSCAN5AQ9BUG6 496 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 CCDC90BQ9GZT6 254 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 MMP27Q9H306 513 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TOR3AQ9H497 397 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 EHD1Q9H4M9 534 aa5.86□□□□□ -1.47
CPSF2-205ENST00000556622 TRPV4Q9HBA0 871 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms