RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 CTAGE15A4D2H0 777 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 C4orf51C9J302 202 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 EIF3FO00303 357 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 GOSR1O95249 250 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 TNNI3P19429 210 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 SLC1A2P43004 574 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 AGFG1P52594 562 aaKnown RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 HSD17B7P56937 341 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 DHX9Q08211 1270 aaKnown RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 ACSF3Q4G176 576 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 DUPD1Q68J44 220 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 UGT3A1Q6NUS8 523 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 C4orf22Q6V702 233 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 CTAGE6Q86UF2 777 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 CXorf67Q86X51 503 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 LACC1Q8IV20 430 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 ANKRD53Q8N9V6 530 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 CCT6BQ92526 530 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 DAZLQ92904 295 aaKnown RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 NEIL2Q969S2 332 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 RUNDC3BQ96NL0 473 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 OR4K3Q96R72 315 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 AIF1LQ9BQI0 150 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 BDH2Q9BUT1 245 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 ZNF703Q9H7S9 590 aaPredicted RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 HOMER3Q9NSC5 361 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 REXO2Q9Y3B8 237 aaKnown RBP12.85□□□□□ -0.35
ACTN1-219ENST00000556432 DYRK1BQ9Y463 629 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 NBEAL1Q6ZS30 2694 aa12.85□□□□□ -0.35
ACTN1-219ENST00000556432 KDM4EB2RXH2 506 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-219ENST00000556432 HRGP04196 525 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 RFPL3SP0C7P2 107 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 CEACAM8P31997 349 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-219ENST00000556432 HNRNPFP52597 415 aaKnown RBP12.84□□□□□ -0.35
ACTN1-219ENST00000556432 RAB38P57729 211 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 STXBP1P61764 594 aaKnown RBP12.84□□□□□ -0.35
ACTN1-219ENST00000556432 SARNPP82979 210 aaKnown RBP12.84□□□□□ -0.35
ACTN1-219ENST00000556432 CDK16Q00536 496 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 REEP5Q00765 189 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 SORDQ00796 357 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 SIX1Q15475 284 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-219ENST00000556432 PRAMEF20Q5VT98 475 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 SLC22A10Q63ZE4 541 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 TMPRSS11BQ86T26 416 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 ZNF321PQ8N8H1 164 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 RNF214Q8ND24 703 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 TMEM52Q8NDY8 209 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 OR5L2Q8NGL0 311 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 NEIL3Q8TAT5 605 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 HSPBAP1Q96EW2 488 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 LINGO1Q96FE5 620 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 NDNQ99608 321 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 TRIM54Q9BYV2 358 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 EPB41L4BQ9H329 900 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 EIF3LQ9Y262 564 aaKnown RBP12.84□□□□□ -0.35
ACTN1-219ENST00000556432 PCDHGB3Q9Y5G1 929 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 MAD1L1Q9Y6D9 718 aa12.84□□□□□ -0.35
ACTN1-219ENST00000556432 ZANQ9Y493 2812 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 A0A088AWK7 358 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 TCRBV7S3A2A0A539 114 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 TRIM64A6NGJ6 449 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 AHRRA9YTQ3 701 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 CASKO14936 926 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 ERI3O43414 337 aaKnown RBP12.83□□□□□ -0.36
ACTN1-219ENST00000556432 B3GALT2O43825 422 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 GUCA1CO95843 209 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 EPPINO95925 133 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 SERPINA6P08185 405 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 ZNF10P21506 573 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-219ENST00000556432 GDF1P27539 372 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 TIMP3P35625 211 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 ZNF136P52737 540 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 RNF4P78317 190 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 STX4Q12846 297 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 RUNX2Q13950 521 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-219ENST00000556432 BBS9Q3SYG4 887 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 YTHDF3Q7Z739 585 aaKnown RBP12.83□□□□□ -0.36
ACTN1-219ENST00000556432 ZNF595Q8IYB9 648 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 MORN4Q8NDC4 146 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 FAM13CQ8NE31 585 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 OR56A3Q8NH54 315 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 OR14A16Q8NHC5 309 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 CALML6Q8TD86 181 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 ATL1Q8WXF7 558 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 GAL3ST3Q96A11 431 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 HES6Q96HZ4 224 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 PELI2Q9HAT8 420 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 ZFP64Q9NPA5 681 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 C20orf96Q9NUD7 363 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-219ENST00000556432 COPS7AQ9UBW8 275 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 TRPS1Q9UHF7 1281 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 ADAM21Q9UKJ8 722 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 FBXO5Q9UKT4 447 aa12.83□□□□□ -0.36
ACTN1-219ENST00000556432 A0A1W2PPR1 153 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 SYNDIG1LA6NDD5 238 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 RNF212BA8MTL3 300 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 ZNF354AO60765 605 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms