RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 FBXL19Q6PCT2 694 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 HACD2Q6Y1H2 254 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CFAP77Q6ZQR2 320 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 S100A7AQ86SG5 101 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 DDIASQ8IXT1 998 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 RGL4Q8IZJ4 473 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PDPRQ8NCN5 879 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TMIEQ8NEW7 156 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 FAM110BQ8TC76 370 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SLCO4A1Q96BD0 722 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ELP4Q96EB1 424 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SCRN2Q96FV2 425 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 C7orf34Q96L11 122 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF382Q96SR6 550 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CCDC90BQ9GZT6 254 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 NSUN3Q9H649 340 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ABCB9Q9NP78 766 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SPAG4Q9NPE6 437 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ASAH2Q9NR71 780 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TAS2R10Q9NYW0 307 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 TAS2R3Q9NYW6 316 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CCDC59Q9P031 241 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 ERVK-18Q9QC07 812 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 SLCO3A1Q9UIG8 710 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 CNOT11Q9UKZ1 510 aaKnown RBP4.89□□□□□ -1.63
TMEM260-210ENST00000556422 PPT2Q9UMR5 302 aa4.89□□□□□ -1.63
TMEM260-210ENST00000556422 DENND4AQ7Z401 1863 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 GLYATL1P3A0A0U1RQE8 302 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 CXorf51AA0A1B0GTR3 108 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 MEX3AA1L020 520 aaKnown RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 NME4O00746 187 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 FFAR2O15552 330 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 DNAJA2O60884 412 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 AKR7A3O95154 331 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 IGSF6O95976 241 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 PNPP00491 289 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 PLATP00750 562 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ADH1AP07327 375 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 C8BP07358 591 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 NUDT7P0C024 238 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 UROSP10746 265 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 CKMT2P17540 419 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 DDCP20711 480 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 GPR3P46089 330 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TPMTP51580 245 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 MAPK12P53778 367 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TRAF3Q13114 568 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TP53BP2Q13625 1128 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 RCAN2Q14206 197 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 GALEQ14376 348 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 GRM7Q14831 915 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 PCBP2Q15366 365 aaKnown RBP eCLIP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TRIP10Q15642 601 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 USF2Q15853 346 aaPredicted RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 LRRC73Q5JTD7 316 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 BLOC1S3Q6QNY0 202 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 SCIMPQ6UWF3 145 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM108Q6UXF1 575 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 DPY19L3Q6ZPD9 716 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TAF8Q7Z7C8 310 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ADIPOR2Q86V24 386 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 CMIPQ8IY22 773 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 RBFAQ8N0V3 343 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 NAGSQ8N159 534 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 NXPE1Q8N323 547 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM102Q8N9M5 508 aaPredicted RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 OR2L5Q8NG80 312 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 HBEGFQ99075 208 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ACTL8Q9H568 366 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 POMT1Q9Y6A1 747 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 NUP214P35658 2090 aaPredicted RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TRBV23-1A0A0A0MS06 115 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 C5orf51A6NDU8 294 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 CENPXA8MT69 81 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 A8MXE2 369 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 SLC25A14O95258 325 aaPredicted RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 NADKO95544 446 aaPredicted RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 PTBP3O95758 552 aaKnown RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 CYBBP04839 570 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TIMP2P16035 220 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF7P17097 686 aaPredicted RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 LBPP18428 481 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 IL12AP29459 219 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 SERPINA4P29622 427 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 GCH1P30793 250 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 SPAM1P38567 509 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 REEP5Q00765 189 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ADAM15Q13444 863 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TEAD2Q15562 447 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ATP13A5Q4VNC0 1218 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 KLHL12Q53G59 568 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 C16orf62Q7Z3J2 963 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 GOLGA7Q7Z5G4 137 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM199Q8N511 208 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 CDYL2Q8N8U2 506 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 MRPL43Q8N983 215 aaKnown RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 CHST14Q8NCH0 376 aa4.88□□□□□ -1.63
TMEM260-210ENST00000556422 SP7Q8TDD2 431 aaPredicted RBP4.88□□□□□ -1.63
TMEM260-210ENST00000556422 ADAMTS18Q8TE60 1221 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms