RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 RGMAQ96B86 450 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 MTFMTQ96DP5 389 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 PKNOX2Q96KN3 472 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 FAM111AQ96PZ2 611 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 SMC6Q96SB8 1091 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 SERPINI1Q99574 410 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 MAPKAP1Q9BPZ7 522 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 RBCK1Q9BYM8 510 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 SLC29A3Q9BZD2 475 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ROGDIQ9GZN7 287 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 DDX31Q9H8H2 851 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 LYRM4Q9HD34 91 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 SSU72Q9NP77 194 aaKnown RBP9.07□□□□□ -0.96
SRP54-210ENST00000556380 ASB4Q9Y574 426 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 ACTL7BQ9Y614 415 aa9.07□□□□□ -0.96
SRP54-210ENST00000556380 A0A088AWK7 358 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 A0A0A6YYD5 115 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 IGHV3-20A0A0C4DH32 117 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 SERTM1A2A2V5 107 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 A6NL46 340 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 MKRN2OSH3BPM6 223 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 TGFBR3LH3BV60 316 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 TMPRSS11DO60235 418 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 PRMT3O60678 531 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 CDC123O75794 336 aaPredicted RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 PDYNP01213 254 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 PRB1P04280 392 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 ENO1P06733 434 aaKnown RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 DHRS4L1P0CG22 281 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 ZNF10P21506 573 aaPredicted RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 JAK1P23458 1154 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 FOXA1P55317 472 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 EEF1A2Q05639 463 aaKnown RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 TBL3Q12788 808 aaKnown RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 AIMP2Q13155 320 aaKnown RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 MYBPC3Q14896 1274 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 NSDHLQ15738 373 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 AP5B1Q2VPB7 878 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 ATG14Q6ZNE5 492 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 CPEB2Q7Z5Q1 589 aaKnown RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 METTL4Q8N3J2 472 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 CLEC1AQ8NC01 280 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 C9orf43Q8TAL5 461 aaPredicted RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 METTL6Q8TCB7 284 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 PSMF1Q92530 271 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 ZBTB9Q96C00 473 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 CSF3RQ99062 836 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 SMAD5Q99717 465 aaKnown RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 SLC25A23Q9BV35 468 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 NUDT9Q9BW91 350 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 SLC25A18Q9H1K4 315 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 ELOVL6Q9H5J4 265 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 ZNF552Q9H707 407 aaPredicted RBP9.06□□□□□ -0.96
SRP54-210ENST00000556380 BRF2Q9HAW0 419 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 ZNF160Q9HCG1 818 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 NECTIN3Q9NQS3 549 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 MID2Q9UJV3 735 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 SNX6Q9UNH7 406 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 STK38LQ9Y2H1 464 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 MMACHCQ9Y4U1 282 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 FLNCQ14315 2725 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 DOCK10Q96BY6 2186 aa9.06□□□□□ -0.96
SRP54-210ENST00000556380 GCN1Q92616 2671 aaKnown RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 TCRBV16S1A1N1A0A5B0 115 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 PSMD12O00232 456 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 PROM1O43490 865 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CTNSO60931 367 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ULK1O75385 1050 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 KRT6AP02538 564 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 KRT6BP04259 564 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 SERPINA7P05543 415 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 BPGMP07738 259 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CELA2AP08217 269 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CHN1P15882 459 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 H2AFXP16104 143 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 NR1D1P20393 614 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 MAOAP21397 527 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ARRB2P32121 409 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ARL1P40616 181 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 SSR2P43308 183 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 KRT6CP48668 564 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 HTR6P50406 440 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 HNRNPH2P55795 449 aaKnown RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 HSD17B7P56937 341 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 PHEXP78562 749 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ZNF33BQ06732 778 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 GALNT1Q10472 559 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 SLAMF1Q13291 335 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CASP8Q14790 479 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ABRAXAS2Q15018 415 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 SFT2D3Q587I9 215 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CFAP157Q5JU67 520 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CES4AQ5XG92 561 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 PLAG1Q6DJT9 500 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 TTC19Q6DKK2 380 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 ZNF595Q8IYB9 648 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ZNF843Q8N446 348 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CCDC63Q8NA47 563 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ADAMTS18Q8TE60 1221 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms