RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 L3HYPDHQ96EM0 354 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ZNF354BQ96LW1 612 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ZNF382Q96SR6 550 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 SERPINI1Q99574 410 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 SORBS1Q9BX66 1292 aaKnown RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ZNF717Q9BY31 904 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 SLC29A3Q9BZD2 475 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ELOVL6Q9H5J4 265 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ADAP2Q9NPF8 381 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 MS4A12Q9NXJ0 267 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 PLA2G3Q9NZ20 509 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 ABI3Q9P2A4 366 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 TRPS1Q9UHF7 1281 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 FBXW2Q9UKT8 454 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 EMCNQ9ULC0 261 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 STK38LQ9Y2H1 464 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 V9GYY5 206 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 USP9XQ93008 2570 aaPredicted RBP10.79□□□□□ -0.68
SLIRP-206ENST00000556375 PTPN13Q12923 2485 aa10.79□□□□□ -0.68
SLIRP-206ENST00000556375 A0A0A6YYD5 115 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 TRAV17A0A0B4J275 112 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 A0A1B0GTL3 188 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 OR5H15A6NDH6 313 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 A8MUI8 341 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 FOXO6A8MYZ6 492 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 VPS4BO75351 444 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 MYO1DO94832 1006 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 SUPT7LO94864 414 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 MLYCDO95822 493 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 WDPCPO95876 746 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 PROCP04070 461 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 TSPAN8P19075 237 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 IMPDH1P20839 514 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 CPN2P22792 545 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 PPP2R1BP30154 601 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 BSGP35613 385 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 TNFRSF17Q02223 184 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 SLAMF1Q13291 335 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 SERTAD2Q14140 314 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 ELAVL1Q15717 326 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 INAQ16352 499 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 MEP1AQ16819 746 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 CCDC153Q494R4 210 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 UNC50Q53HI1 259 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 ACER2Q5QJU3 275 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 FCRLBQ6BAA4 426 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 MRM1Q6IN84 353 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 RPUSD3Q6P087 351 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 ZYG11AQ6WRX3 759 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 BEST3Q8N1M1 668 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 KIF2BQ8N4N8 673 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 C7orf57Q8NEG2 295 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 B3GNT7Q8NFL0 401 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 TRPC4APQ8TEL6 797 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 DDX31Q9H8H2 851 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 PNO1Q9NRX1 252 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 LYARQ9NX58 379 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 MAP10Q9P2G4 905 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 ZNF225Q9UK10 706 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 VPS4AQ9UN37 437 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 SNX6Q9UNH7 406 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 PPIEQ9UNP9 301 aaKnown RBP10.78□□□□□ -0.68
SLIRP-206ENST00000556375 ESPL1Q14674 2120 aa10.78□□□□□ -0.68
SLIRP-206ENST00000556375 A8MUA0 341 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 PPP6CO00743 305 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 CDK2AP1O14519 115 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 COPEO14579 308 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 PLIN3O60664 434 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 EEDO75530 441 aaKnown RBP10.77□□□□□ -0.69
SLIRP-206ENST00000556375 OR4F21O95013 312 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 MYL2P10916 166 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 CRHR1P34998 444 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 BUD31P41223 144 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-206ENST00000556375 CCT5P48643 541 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 HNRNPH2P55795 449 aaKnown RBP10.77□□□□□ -0.69
SLIRP-206ENST00000556375 IGLV3-21P80748 117 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-206ENST00000556375 STX4Q12846 297 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 LCP2Q13094 533 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 GPRIN3Q6ZVF9 776 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 GPR180Q86V85 440 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 ARMC10Q8N2F6 343 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 TMEM132CQ8N3T6 1108 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 CISD2Q8N5K1 135 aaKnown RBP10.77□□□□□ -0.69
SLIRP-206ENST00000556375 APCDD1LQ8NCL9 501 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 CATSPER1Q8NEC5 780 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 OR1N1Q8NGS0 311 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 OR2W6PQ8NHA6 318 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 RDH11Q8TC12 318 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 SELENOMQ8WWX9 145 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 C19orf60Q96EN9 201 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 VMP1Q96GC9 406 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 BARD1Q99728 777 aaKnown RBP10.77□□□□□ -0.69
SLIRP-206ENST00000556375 NPAS2Q99743 824 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.77□□□□□ -0.69
SLIRP-206ENST00000556375 BRF2Q9HAW0 419 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 ASF1BQ9NVP2 202 aa10.77□□□□□ -0.69
SLIRP-206ENST00000556375 MKS1Q9NXB0 559 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms