RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 SGCBQ16585 318 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 ODF2Q5BJF6 829 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 PRAMEF8Q5VWM4 474 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 ZNF776Q68DI1 518 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-218ENST00000556256 TCEAL6Q6IPX3 200 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 SLC27A4Q6P1M0 643 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 KIF6Q6ZMV9 814 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 MACC1Q6ZN28 852 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 PRSS42Q7Z5A4 293 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 ADCK1Q86TW2 530 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 CCDC185Q8N715 623 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 NAT8LQ8N9F0 302 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 RNASE8Q8TDE3 154 aaKnown RBP2.41□□□□□ -2.02
SCFD1-218ENST00000556256 CHPT1Q8WUD6 406 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 AP2M1Q96CW1 435 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 CABS1Q96KC9 395 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 PCDHB18PQ96TA0 734 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 CCM2Q9BSQ5 444 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 OSBPL8Q9BZF1 889 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 TSPYL1Q9H0U9 437 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 DPEP2Q9H4A9 486 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 TNFRSF19Q9NS68 423 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 MTRRQ9UBK8 725 aa2.41□□□□□ -2.02
SCFD1-218ENST00000556256 C2orf92A0A1B0GVN3 265 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 C5orf51A6NDU8 294 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 M0R296 226 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 GRAP2O75791 330 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 OR1D2P34982 312 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 FEN1P39748 380 aaKnown RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 NME5P56597 212 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 MFGE8Q08431 387 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 CNTN1Q12860 1018 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 MAPK11Q15759 364 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 ACKR1Q16570 336 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 C3AR1Q16581 482 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 C2orf76Q3KRA6 126 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 LRRC37A5PQ49AS3 106 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 CES4AQ5XG92 561 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 C3P1Q6ZMU1 363 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 Q6ZVQ6 151 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 CYP4V2Q6ZWL3 525 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 SLC25A42Q86VD7 318 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 SFRP1Q8N474 314 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 CARNMT1Q8N4J0 409 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 SMYD1Q8NB12 490 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 RNF149Q8NC42 400 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 LPCAT1Q8NF37 534 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 C11orf45Q8TAV5 145 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 ATP8B4Q8TF62 1192 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 SEPT8Q92599 483 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 KRT35Q92764 455 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 C11orf52Q96A22 123 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 SLC35C1Q96A29 364 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 BPIFA2Q96DR5 249 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 CNRIP1Q96F85 164 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 PAPOLGQ9BWT3 736 aaKnown RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 NUSAP1Q9BXS6 441 aaKnown RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 SLC5A7Q9GZV3 580 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 CUEDC2Q9H467 287 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 MAGEF1Q9HAY2 307 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 MID1IP1Q9NPA3 183 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 DNAJC11Q9NVH1 559 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 CWC25Q9NXE8 425 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 NDE1Q9NXR1 346 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 TRPC4Q9UBN4 977 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 UBQLN2Q9UHD9 624 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 LNPEPQ9UIQ6 1025 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 STX8Q9UNK0 236 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 FOXA2Q9Y261 457 aaPredicted RBP2.4□□□□□ -2.03
SCFD1-218ENST00000556256 NCKAP1Q9Y2A7 1128 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 UMODL1Q5DID0 1318 aa2.4□□□□□ -2.03
SCFD1-218ENST00000556256 LOC105371242A0A075B767 164 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ATP6AP2A0A1C7CYW4 349 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 SHISA7A6NL88 538 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 A8MXK9 166 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ANHXE9PGG2 379 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 CRCPO75575 148 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 STBD1O95210 358 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 FGF19O95750 216 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ANGPTL1O95841 491 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 OLFM2O95897 454 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ODC1P11926 461 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ACKR3P25106 362 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 CTNNA2P26232 953 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 GJB2P29033 226 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 SLC1A3P43003 542 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 CCR4P51679 360 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 UCP2P55851 309 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 BTG1P62324 171 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ACTN3Q08043 901 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-218ENST00000556256 MSLNQ13421 630 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-218ENST00000556256 CEACAM7Q14002 265 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 HFEQ30201 348 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ZNF841Q6ZN19 808 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 C17orf107Q6ZR85 190 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ZER1Q7Z7L7 766 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 NLRP14Q86W24 1093 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 CNTN4Q8IWV2 1026 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 SPC24Q8NBT2 197 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 MSANTD4Q8NCY6 345 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms