RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 EEDO75530 441 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 CREG1O75629 220 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ATP6AP2O75787 350 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 B3GALT4O96024 378 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 GBAP04062 536 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 NR2F6P10588 404 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PRPS2P11908 318 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 DRD2P14416 443 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 LIFP15018 202 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 TPP2P29144 1249 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 RPL3P39023 403 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 EIF2S3P41091 472 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 HSD17B7P56937 341 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ERVK-8P63133 956 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 TNFRSF17Q02223 184 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 EMX2Q04743 252 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 KLC1Q07866 573 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ZNF763Q0D2J5 394 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 SLC13A2Q13183 592 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 COL9A2Q14055 689 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 SERTAD2Q14140 314 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 HEPACAMQ14CZ8 416 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 RPS6KA2Q15349 733 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 SYT16Q17RD7 645 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 CRTC2Q53ET0 693 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 VWA2Q5GFL6 755 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 C6orf136Q5SQH8 315 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 NXNQ6DKJ4 435 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 MRM1Q6IN84 353 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 LCN10Q6JVE6 187 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ATG14Q6ZNE5 492 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 QSOX2Q6ZRP7 698 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 IKBIPQ70UQ0 350 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 SPATA19Q7Z5L4 167 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 VASH2Q86V25 355 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PROSER1Q86XN7 944 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ZC3H7AQ8IWR0 971 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 SPACA3Q8IXA5 215 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PRSS58Q8IYP2 241 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 SAMD14Q8IZD0 417 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 TMEM132CQ8N3T6 1108 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 KDF1Q8NAX2 398 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 OR2T11Q8NH01 316 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 CEP70Q8NHQ1 597 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ACTRT2Q8TDY3 377 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 STARD8Q92502 1023 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 TANKQ92844 425 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PPP1R36Q96LQ0 422 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PTCHD1Q96NR3 888 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 SPSB2Q99619 263 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 MAPKAP1Q9BPZ7 522 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 ZNF717Q9BY31 904 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 ACTL8Q9H568 366 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 SOX17Q9H6I2 414 aaPredicted RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 RPF2Q9H7B2 306 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 GIMAP4Q9NUV9 329 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
TDP1-214ENST00000556063 KCMF1Q9P0J7 381 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 C3orf18Q9UK00 162 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 MKL2Q9ULH7 1088 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 PTGDR2Q9Y5Y4 395 aa7.2□□□□□ -1.26
TDP1-214ENST00000556063 A0A1W2PR48 441 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 CYR61O00622 381 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 SDHDO14521 159 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 TERTO14746 1132 aaKnown RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 PROM1O43490 865 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 DYRK3O43781 588 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 ALOX12BO75342 701 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 KLF7O75840 302 aaPredicted RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 AIFM1O95831 613 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 JUNP05412 331 aaKnown RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 C8orf89P0DMQ9 161 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 ALOX15P16050 662 aaPredicted RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 MMP11P24347 488 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 OTX2P32243 289 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 HPCAL1P37235 193 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 ALDH9A1P49189 494 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 AQP5P55064 265 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 HNRNPH2P55795 449 aaKnown RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 TAS2R50P59544 299 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 SNRPNP63162 240 aaKnown RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 IRX1P78414 480 aaPredicted RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 ACTN3Q08043 901 aaPredicted RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 C2orf80Q0P641 193 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 STX4Q12846 297 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 KIAA0040Q15053 153 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 NSDHLQ15738 373 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 RFTN2Q52LD8 501 aaPredicted RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 NDUFAF5Q5TEU4 345 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 IL23RQ5VWK5 629 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 OR52E8Q6IFG1 317 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 OGFOD2Q6N063 350 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 EPGNQ6UW88 154 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 CCDC81Q6ZN84 652 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 SHISA6Q6ZSJ9 500 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 R3HCC1LQ7Z5L2 792 aaKnown RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 FAM47BQ8NA70 645 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 PLPP5Q8NEB5 264 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 CDC26Q8NHZ8 85 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 C16orf78Q8WTQ4 265 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms