RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 CA5BP1Q8WTZ4 195 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 PTPMT1Q8WUK0 201 aaPredicted RBP7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 CCT6BQ92526 530 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 ANP32BQ92688 251 aaKnown RBP7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 TANKQ92844 425 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 NCLNQ969V3 563 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 CMTM7Q96FZ5 175 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 KRT12Q99456 494 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 TMEM79Q9BSE2 394 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 MS4A8Q9BY19 250 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 TRIM8Q9BZR9 551 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 ZDHHC11Q9H8X9 412 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 COPS7BQ9H9Q2 264 aaPredicted RBP7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 SMYD2Q9NRG4 433 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 PNO1Q9NRX1 252 aaKnown RBP7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 HPF1Q9NWY4 346 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 ZNF223Q9UK11 482 aaPredicted RBP7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 PCDHGB3Q9Y5G1 929 aa7.24□□□□□ -1.25
PTCSC3-201ENST00000556013 APCP25054 2843 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 A0A1B0GTH9 108 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 TCRBV9S1A1TA0A576 114 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 SYCE1LA8MT33 242 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 CXorf49A8MYA2 514 aaPredicted RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 C4orf51C9J302 202 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 K7EPI3 171 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 ACOT7O00154 380 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 BCKDKO14874 412 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 DYRK3O43781 588 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 HS6ST1O60243 411 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 SUSD5O60279 629 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 UGDHO60701 494 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 IFNA16P05015 189 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 TNNI3P19429 210 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 HIST1H1TP22492 207 aaPredicted RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 ATP5A1P25705 553 aaKnown RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 TLX1P31314 330 aaPredicted RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 PIK3CBP42338 1070 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 HSPA7P48741 367 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 RNF4P78317 190 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 IGLV3-21P80748 117 aaPredicted RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 CMPK2Q5EBM0 449 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 PIGGQ5H8A4 983 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 LIPJQ5W064 366 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 MED27Q6P2C8 311 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 RTL4Q6ZR62 310 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 GK5Q6ZS86 529 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 MDGA2Q7Z553 956 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 FGD2Q7Z6J4 655 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 SLC22A16Q86VW1 577 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 ZCCHC7Q8N3Z6 543 aaKnown RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 ACOT4Q8N9L9 421 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 ASB15Q8WXK1 588 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 RND1Q92730 232 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 SDCCAG3Q96C92 435 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 RBM18Q96H35 190 aaKnown RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 ART5Q96L15 291 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 LURAP1Q96LR2 239 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 F2RL3Q96RI0 385 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 RASL10BQ96S79 203 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 PELOQ9BRX2 385 aaKnown RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 CENPKQ9BS16 269 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 TRIM31Q9BZY9 425 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 RAB17Q9H0T7 212 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 IL1RL2Q9HB29 575 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 SAYSD1Q9NPB0 183 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 NUDT4Q9NZJ9 180 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 CD274Q9NZQ7 290 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 SH3BGRL2Q9UJC5 107 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 RNF112Q9ULX5 631 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 PPT2Q9UMR5 302 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 ERVK-11Q9UQG0 969 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 UTP11Q9Y3A2 253 aaKnown RBP7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 PCDHGA11Q9Y5H2 935 aa7.23□□□□□ -1.25
PTCSC3-201ENST00000556013 NCF1BA6NI72 391 aaPredicted RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 NCF1CA8MVU1 366 aaPredicted RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 C17orf105B2RV13 164 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 FAM47E-STBD1D6RA91 191 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 H0YIV9 168 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 TGFBR3LH3BV60 316 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 FANCGO15287 622 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 PHGDHO43175 533 aaKnown RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 KLK8O60259 260 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 KERAO60938 352 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 OR2J2O76002 312 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 GLSO94925 669 aaPredicted RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 S100BP04271 92 aaPredicted RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 TPOP07202 933 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 LTA4HP09960 611 aaKnown RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 COX7A2P14406 83 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 NCF1P14598 390 aaPredicted RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 EPB42P16452 691 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 IGFBP2P18065 325 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 EPORP19235 508 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 CD22P20273 847 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 CPN2P22792 545 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 PTX3P26022 381 aaPredicted RBP7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 CHRNB4P30926 498 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 STX2P32856 288 aa7.22□□□□□ -1.25
PTCSC3-201ENST00000556013 PTGER1P34995 402 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms