RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 IMPG1Q17R60 797 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 SMU1Q2TAY7 513 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 DEPDC1Q5TB30 811 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 ABHD17CQ6PCB6 329 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 RINLQ6ZS11 566 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 COX15Q7KZN9 410 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 PRSS41Q7RTY9 318 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 PAGE2Q7Z2X7 111 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 SPATA19Q7Z5L4 167 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 NUDT13Q86X67 352 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 PDSS2Q86YH6 399 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 RAB43Q86YS6 212 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 DTWD1Q8N5C7 304 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 AMER3Q8N944 861 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 OR2Y1Q8NGV0 311 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-218ENST00000555213 MIEF2Q96C03 454 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 APIPQ96GX9 242 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 VPS50Q96JG6 964 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 SLC45A3Q96JT2 553 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 FCRL1Q96LA6 429 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 QRFPRQ96P65 431 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 OR1F2PQ96R84 312 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 SERINC2Q96SA4 455 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 NPLQ9BXD5 320 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-218ENST00000555213 BRINP2Q9C0B6 783 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 OR51B5Q9H339 312 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 KLHL31Q9H511 634 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 PFDN4Q9NQP4 134 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 SDR39U1Q9NRG7 319 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-218ENST00000555213 AIG1Q9NVV5 245 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 CTSFQ9UBX1 484 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 TCFL5Q9UL49 500 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 PTRH2Q9Y3E5 179 aaKnown RBP10.31□□□□□ -0.76
SHMT2-218ENST00000555213 SPEGQ15772 3267 aa10.31□□□□□ -0.76
SHMT2-218ENST00000555213 IGLV3-12A0A075B6K2 115 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 A0A0G2JN53 185 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 LOC100653049A0A140TA62 436 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 TAF4O00268 1085 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 SAP18O00422 153 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 TERTO14746 1132 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 SLC22A2O15244 555 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 SH3BGRLO75368 114 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 CREG1O75629 220 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 KRT34O76011 436 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 RSL1D1O76021 490 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 IGHEP01854 428 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 CYC1P08574 325 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 COX4I1P13073 169 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 RNH1P13489 461 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 HIST1H1TP22492 207 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 PRDX6P30041 224 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 CPOXP36551 454 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 XCR1P46094 333 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 ERVK-8P63133 956 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 RAE1P78406 368 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 MAT1AQ00266 395 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 NKG7Q16617 165 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 MFSD4BQ5TF39 518 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 IL23RQ5VWK5 629 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 LCN10Q6JVE6 187 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 MRPL14Q6P1L8 145 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 PAOXQ6QHF9 649 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 POU5F2Q8N7G0 328 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 OR51Q1Q8NH59 317 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 STT3BQ8TCJ2 826 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 CHTF18Q8WVB6 975 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 TUBB6Q9BUF5 446 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 CRB3Q9BUF7 120 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 TGIF2Q9GZN2 237 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 AICDAQ9GZX7 198 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 AKIRIN1Q9H9L7 192 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 SLC22A11Q9NSA0 550 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 ASIC5Q9NY37 505 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 TAS2R1Q9NYW7 299 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 IL17BQ9UHF5 180 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 TAGLN3Q9UI15 199 aa10.3□□□□□ -0.76
SHMT2-218ENST00000555213 MRPS33Q9Y291 106 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 MDC1Q14676 2089 aaKnown RBP10.3□□□□□ -0.76
SHMT2-218ENST00000555213 VSTM2BA6NLU5 285 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 FBP2O00757 339 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 PLPP1O14494 284 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 PCDH17O14917 1159 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 EFSO43281 561 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 CHST10O43529 356 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 RGS14O43566 566 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 ATP5HO75947 161 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 SCELO95171 688 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 RECKO95980 971 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 ZGLP1P0C6A0 271 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 SMIM10L1P0DMW3 83 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 G6PDP11413 515 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 F8A1P23610 371 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 ATP5A1P25705 553 aaKnown RBP10.29□□□□□ -0.76
SHMT2-218ENST00000555213 CERS1P27544 350 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 UFM1P61960 85 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 RPS18P62269 152 aaKnown RBP10.29□□□□□ -0.76
SHMT2-218ENST00000555213 OLR1P78380 273 aa10.29□□□□□ -0.76
SHMT2-218ENST00000555213 ACTN3Q08043 901 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-218ENST00000555213 VAC14Q08AM6 782 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms