RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 FOXA1P55317 472 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 TBL3Q12788 808 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 KLRB1Q12918 225 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 AGAP7PQ5VUJ5 663 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 IRAK1BP1Q5VVH5 260 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 PLAG1Q6DJT9 500 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 MRM1Q6IN84 353 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 JMJD6Q6NYC1 403 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 IGFL2Q6UWQ7 119 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 RIPOR1Q6ZS17 1223 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 CROCCP2Q86T23 111 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 GPR180Q86V85 440 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 HPS6Q86YV9 775 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 METTL4Q8N3J2 472 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 AGAP4Q96P64 663 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 KCNA7Q96RP8 456 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 GATA5Q9BWX5 397 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 MRPL1Q9BYD6 325 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 SSU72Q9NP77 194 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 MS4A12Q9NXJ0 267 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 AHSPQ9NZD4 102 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 FBXW2Q9UKT8 454 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 ATG4BQ9Y4P1 393 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 ASB4Q9Y574 426 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 TIMM22Q9Y584 194 aa12.11□□□□□ -0.47
MTHFD1-208ENST00000554739 H3BQF6 201 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 CTIFO43310 598 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 PROM1O43490 865 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 GBAP04062 536 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 FAM58BPP0C7Q3 252 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 ITGAMP11215 1152 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 CHN1P15882 459 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 CPN2P22792 545 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 HMOX2P30519 316 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 ETV4P43268 484 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 HNRNPH2P55795 449 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 ZNF33BQ06732 778 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 SLC13A2Q13183 592 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 PAPD4Q6PIY7 484 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 NUDT13Q86X67 352 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 RBMXL3Q8N7X1 1067 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 TEX19Q8NA77 164 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 M1APQ8TC57 530 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 BRIX1Q8TDN6 353 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 CNDP1Q96KN2 507 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 LMF1Q96S06 567 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 HBEGFQ99075 208 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 LPAR4Q99677 370 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 CENPHQ9H3R5 247 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 TNFRSF12AQ9NP84 129 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 MMP25Q9NPA2 562 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 NMRK1Q9NWW6 199 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 VPS29Q9UBQ0 182 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 ADAM29Q9UKF5 820 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 SLC12A4Q9UP95 1085 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 SPACA6W5XKT8 324 aa12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-208ENST00000554739 A0A1W2PR48 441 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 SERTM1A2A2V5 107 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 BLACEA4D250 179 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 WASHC1A8K0Z3 465 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 DPM1O60762 260 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 KLK1P06870 262 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 BPGMP07738 259 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 HSD3B1P14060 373 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 HSD3B2P26439 372 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 PPP2R1BP30154 601 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 SOX11P35716 441 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 CD97P48960 835 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 HTR6P50406 440 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 SLC26A5P58743 744 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 AP2B1P63010 937 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 GALNT1Q10472 559 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 ASPHQ12797 758 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 CSTF3Q12996 717 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 MPP2Q14168 576 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 EXT1Q16394 746 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 BTBD16Q32M84 506 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 NADK2Q4G0N4 442 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 CRB2Q5IJ48 1285 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 C18orf63Q68DL7 685 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 H3F3CQ6NXT2 135 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 CYP20A1Q6UW02 462 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 ISLR2Q6UXK2 745 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 CLNKQ7Z7G1 428 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 GBP7Q8N8V2 638 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 OR6Y1Q8NGX8 325 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 ELP5Q8TE02 316 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 CHTF18Q8WVB6 975 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 TANKQ92844 425 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 ANKRD9Q96BM1 317 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 TRMOQ9BU70 441 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 MECRQ9BV79 373 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 ALOXE3Q9BYJ1 711 aa12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 RPF2Q9H7B2 306 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 LYARQ9NX58 379 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-208ENST00000554739 VTI1BQ9UEU0 232 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms