RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, human

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R3A-204	ENST00000554574	GLYATL1P3	A0A0U1RQE8	302 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574		A0A0U1RQS6	177 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574		A0A1W2PQM1	296 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	hCG_1807616	A0A1W2PRN6	198 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TSPAN11	A1L157	253 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NEMP2	A6NFY4	417 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	C16orf96	A6NNT2	1141 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SYCE1L	A8MT33	242 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574		H3BMM5	538 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574		K7ESM1	405 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	DSCR3	O14972	297 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	MGRN1	O60291	552 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	OR1I1	O60431	355 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PLOD3	O60568	738 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KERA	O60938	352 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SMIM24	O75264	130 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NFATC1	O95644	943 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TSPAN12	O95859	305 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	UGT2B4	P06133	528 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SPARC	P09486	303 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CISD3	P0C7P0	127 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TPBGL	P0DKB5	382 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ZNF30	P17039	623 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ZNF7	P17097	686 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KCNA5	P22460	613 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NFKBIA	P25963	317 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PTPN4	P29074	926 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	FMO4	P31512	558 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SPAM1	P38567	509 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NAA20	P61599	178 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	HERVK_113	P63132	956 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KCNJ2	P63252	427 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	DGCR2	P98153	550 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	EFNB1	P98172	346 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CREB5	Q02930	508 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	RIPK1	Q13546	671 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CDSN	Q15517	529 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	FAM78A	Q5JUQ0	283 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CTSL3P	Q5NE16	218 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SEL1L3	Q68CR1	1132 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	LRRC66	Q68CR7	880 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	UGT3A1	Q6NUS8	523 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CYB5D1	Q6P9G0	228 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KLHL24	Q6TFL4	600 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	FAM151B	Q6UXP7	276 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	GDPD4	Q6W3E5	623 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TMEM184A	Q6ZMB5	413 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	IKBIP	Q70UQ0	350 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TAS2R42	Q7RTR8	314 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	MRGPRE	Q86SM8	312 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	RBFA	Q8N0V3	343 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CCNYL1	Q8N7R7	359 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KDM1B	Q8NB78	822 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ADPRHL1	Q8NDY3	354 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	VN1R2	Q8NFZ6	395 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	STAG3L4	Q8TBR4	150 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CD200R1	Q8TD46	325 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	HCAR2	Q8TDS4	363 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NCSTN	Q92542	709 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	FGF13	Q92913	245 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SGF29	Q96ES7	293 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PDLIM5	Q96HC4	596 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NSL1	Q96IY1	281 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	C5orf34	Q96MH7	638 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ASB2	Q96Q27	587 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	GPR21	Q99679	349 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CCDC106	Q9BWC9	280 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NPL	Q9BXD5	320 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ERVK-6	Q9BXR3	956 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SLC32A1	Q9H598	525 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ZDHHC6	Q9H6R6	413 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	EML4	Q9HC35	981 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ARL8B	Q9NVJ2	186 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ASIC5	Q9NY37	505 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ARMCX1	Q9P291	453 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TRMT6	Q9UJA5	497 aa	Known RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	MTF2	Q9Y483	593 aa	Predicted RBP	4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	MYO10	Q9HD67	2058 aa		4.55	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	IGLV3-16	A0A075B6K0	115 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TEX13C	A0A0J9YWL9	993 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SYNDIG1L	A6NDD5	238 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	TRPC5OS	A6NMA1	111 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574		E5RI56	91 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	CLIC1	O00299	241 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	SLC22A2	O15244	555 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	GRID2	O43424	1007 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KLK8	O60259	260 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	DIAPH2	O60879	1101 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	NIPSNAP2	O75323	286 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	ADH4	P08319	380 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	KRT16	P08779	473 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	RFPL3S	P0C7P2	107 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	COX7A2	P14406	83 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	HOXA5	P20719	270 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	LHCGR	P22888	699 aa		4.54	□□□□□ -1.68
PPP4R3A-204	ENST00000554574	PTGS2	P35354	604 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms