RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 ZNF180Q9UJW8 692 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PPIEQ9UNP9 301 aaKnown RBP8.16□□□□□ -1.1
ACTN1-213ENST00000554508 OSGIN2Q9Y236 505 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 PCDHGA11Q9Y5H2 935 aa8.16□□□□□ -1.1
ACTN1-213ENST00000554508 IQANK1A0A1B0GTG1 560 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 A0A1B0GUH1 482 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 TLDC2A0PJX2 215 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 CCDC151A5D8V7 595 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 A8MUA0 341 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 TRIM49D1C9J1S8 452 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 FCHO1O14526 889 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 LRRTM2O43300 516 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 CTIFO43310 598 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 MYO1DO94832 1006 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 SCELO95171 688 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 LDLRP01130 860 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 TGFB1P01137 390 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 SP1P08047 785 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 STSP08842 583 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 SNRPAP09012 282 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 PCNAP12004 261 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 HIST1H1TP22492 207 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 ATP5A1P25705 553 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 PTX3P26022 381 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 GCAP28676 217 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 EEF1DP29692 281 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 TRHRP34981 398 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 MAGEA12P43365 314 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 SLCO1A2P46721 670 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 CYB561P49447 251 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 HLCSP50747 726 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 HNRNPFP52597 415 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 OC90Q02509 493 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 STX4Q12846 297 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 GTF2H2Q13888 395 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 ELAVL1Q15717 326 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.15□□□□□ -1.14e-6■■□□□ 13.3
ACTN1-213ENST00000554508 TECRLQ5HYJ1 363 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 KHDRBS2Q5VWX1 349 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 SPINK14Q6IE38 97 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 OR4C11Q6IEV9 310 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 SLC25A25Q6KCM7 469 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 GTF2H2CQ6P1K8 395 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 ADGRD1Q6QNK2 874 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 UBE3DQ7Z6J8 389 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 PLD6Q8N2A8 252 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 KIF2BQ8N4N8 673 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 MREGQ8N565 214 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 FAM47BQ8NA70 645 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 FAM98AQ8NCA5 519 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 APCDD1LQ8NCL9 501 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 OR2W6PQ8NHA6 318 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 HUS1BQ8NHY5 278 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 EPS8L3Q8TE67 593 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 DAZLQ92904 295 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 RGMAQ96B86 450 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 VMP1Q96GC9 406 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 SIGLEC12Q96PQ1 595 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 ALOXE3Q9BYJ1 711 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 IPPKQ9H8X2 491 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 ACTR8Q9H981 624 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 MS4A12Q9NXJ0 267 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 LRFN1Q9P244 771 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 CPSF2Q9P2I0 782 aaKnown RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 PSMC3IPQ9P2W1 217 aaPredicted RBP8.15□□□□□ -1.1
ACTN1-213ENST00000554508 VTI1BQ9UEU0 232 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 FETUBQ9UGM5 382 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 CLDN16Q9Y5I7 305 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 CLCA3PQ9Y6N3 262 aa8.15□□□□□ -1.1
ACTN1-213ENST00000554508 TRBV11-1A0A0K0K1C0 115 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 ASPDHA6ND91 283 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 H0YIV9 168 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 STX16-NPEPL1H3BU86 382 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 TGFBR3LH3BV60 316 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 STX16O14662 325 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 MAN1A2O60476 641 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 SMIM24O75264 130 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 NEURL1O76050 574 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 ZFAND5O76080 213 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 CLDN9O95484 217 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 IFNA16P05015 189 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 NUDT17P0C025 328 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 TPP2P29144 1249 aaPredicted RBP8.14□□□□□ -1.11
ACTN1-213ENST00000554508 SSR2P43308 183 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 GPR143P51810 404 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 CCNG1P51959 295 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 RAP1GDS1P52306 607 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 RBPJQ06330 500 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 SERTAD2Q14140 314 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 KRTCAP3Q53RY4 240 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 GFRALQ6UXV0 394 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 ZNF793Q6ZN11 406 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 L3MBTL4Q8NA19 623 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 MORN4Q8NDC4 146 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 TMEM52Q8NDY8 209 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 OR14A16Q8NHC5 309 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 NCLNQ969V3 563 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 RELTQ969Z4 430 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 ATP6V1E2Q96A05 226 aa8.14□□□□□ -1.11
ACTN1-213ENST00000554508 TMEM125Q96AQ2 219 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms