RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MZT1Q08AG7 82 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 MESP2Q0VG99 397 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 MTM1Q13496 603 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 NFYCQ13952 458 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 RCAN2Q14206 197 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 FGL2Q14314 439 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 GAMTQ14353 236 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 ZNF273Q14593 569 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 KCNAB1Q14722 419 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 SLC18A3Q16572 532 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 COL28A1Q2UY09 1125 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 ZNF667Q5HYK9 610 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 ARHGAP40Q5TG30 622 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 PLEKHA7Q6IQ23 1121 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 ESRP1Q6NXG1 681 aaKnown RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 MSANTD2Q6P1R3 559 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 TMEM88Q6PEY1 159 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 UTS2BQ765I0 119 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 SYVN1Q86TM6 617 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 RTN4RL2Q86UN3 420 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 VRK2Q86Y07 508 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 KLBQ86Z14 1044 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 BATF2Q8N1L9 274 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 OR5B17Q8NGF7 314 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 OR6Y1Q8NGX8 325 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 OR52N1Q8NH53 320 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 NFKBIDQ8NI38 313 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 GPBAR1Q8TDU6 330 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 NSMCE1Q8WV22 266 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 FBXO17Q96EF6 278 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 RMND5BQ96G75 393 aaPredicted RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 SLC41A2Q96JW4 573 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 MRGPRX3Q96LB0 322 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 NAPGQ99747 312 aaPredicted RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 MRPL45Q9BRJ2 306 aaKnown RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 FAM213AQ9BRX8 229 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 WDR83Q9BRX9 315 aaKnown RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.59□□□□□ -2
PRPF39-206ENST00000554429 SLC12A9Q9BXP2 914 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 TPSD1Q9BZJ3 242 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.59□□□□□ -2
PRPF39-206ENST00000554429 HDHD2Q9H0R4 259 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 MAGT1Q9H0U3 335 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 TIMMDC1Q9NPL8 285 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 GIMAP4Q9NUV9 329 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 DNAJC17Q9NVM6 304 aaKnown RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.59□□□□□ -2
PRPF39-206ENST00000554429 LRIT1Q9P2V4 623 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 ZNHIT2Q9UHR6 403 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 SARDHQ9UL12 918 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 FZD4Q9ULV1 537 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 NFU1Q9UMS0 254 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 PPIEQ9UNP9 301 aaKnown RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 PLA2G4CQ9UP65 541 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 POFUT2Q9Y2G5 429 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 STARD10Q9Y365 291 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 LIPGQ9Y5X9 500 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 CAPN6Q9Y6Q1 641 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 SHROOM3Q8TF72 1996 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 LRP4O75096 1905 aa2.59□□□□□ -2
PRPF39-206ENST00000554429 MN1Q10571 1320 aaPredicted RBP2.59□□□□□ -2
PRPF39-206ENST00000554429 A0A1W2PR77 199 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 A0A1W2PRX2 142 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TLR4O00206 839 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 BCAT2O15382 392 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 RNF13O43567 381 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MAGEC1O60732 1142 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TBX19O60806 448 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CDH16O75309 829 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 GPC4O75487 556 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SERPINI2O75830 405 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZFPL1O95159 310 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DHFRP00374 187 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 APOA1P02647 267 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MBL2P11226 248 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 PLA2G2AP14555 144 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ADRA2CP18825 462 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ITIH1P19827 911 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ACP1P24666 158 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TACR3P29371 465 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRDX6P30041 224 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MC3RP41968 323 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SLC1A1P43005 524 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RPL34P49207 117 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 ACADVLP49748 655 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CLK3P49761 638 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 TPMTP51580 245 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 IST1P53990 364 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CACNA2D1P54289 1103 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 UCNP55089 124 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ATP5J2P56134 94 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MLF1P58340 268 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SPCS3P61009 180 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 STX1BP61266 288 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TFAMQ00059 246 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 GUCY2DQ02846 1103 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 IL18Q14116 193 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 INPP5AQ14642 412 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PDK4Q16654 411 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PNLIPRP3Q17RR3 467 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms