RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 MS4A12Q9NXJ0 267 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 CPSF2Q9P2I0 782 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 DMGDHQ9UI17 866 aaKnown RBP16.53■□□□□ 0.24
FOXN3-204ENST00000553840 TMCO1Q9UM00 188 aa16.53■□□□□ 0.24
FOXN3-204ENST00000553840 HMX2A2RU54 273 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 KLRC4-KLRK1H3BQV0 150 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 KLK8O60259 260 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 NME2P1O60361 137 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 UGDHO60701 494 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 SH3BGRLO75368 114 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 KRT38O76015 456 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 ALDOAP04075 364 aaKnown RBP16.52■□□□□ 0.24
FOXN3-204ENST00000553840 RBP1P09455 135 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 TNNI3P19429 210 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 NME2P22392 152 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 HIST1H1TP22492 207 aaPredicted RBP16.52■□□□□ 0.24
FOXN3-204ENST00000553840 CPN2P22792 545 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 PIK3CBP42338 1070 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 ARFIP1P53367 373 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 SRSF11Q05519 484 aaKnown RBP16.52■□□□□ 0.24
FOXN3-204ENST00000553840 GTF2H2Q13888 395 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 PCBP2Q15366 365 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■■■■■ 27.9
FOXN3-204ENST00000553840 DEPDC1Q5TB30 811 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 ZNF468Q5VIY5 522 aaPredicted RBP16.52■□□□□ 0.24
FOXN3-204ENST00000553840 GTF2H2CQ6P1K8 395 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 METTL2BQ6P1Q9 378 aaKnown RBP16.52■□□□□ 0.24
FOXN3-204ENST00000553840 MORN4Q8NDC4 146 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 OR14A16Q8NHC5 309 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 RGMAQ96B86 450 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 MAGED4Q96JG8 741 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 GPR137Q96N19 417 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 FRMD6Q96NE9 622 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 CSF3RQ99062 836 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 MAPKAP1Q9BPZ7 522 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 VTI1BQ9UEU0 232 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 KLF13Q9Y2Y9 288 aaPredicted RBP16.52■□□□□ 0.24
FOXN3-204ENST00000553840 YARS2Q9Y2Z4 477 aaKnown RBP16.52■□□□□ 0.24
FOXN3-204ENST00000553840 TSC22D4Q9Y3Q8 395 aa16.52■□□□□ 0.24
FOXN3-204ENST00000553840 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.23
FOXN3-204ENST00000553840 DOPEY1Q5JWR5 2465 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 RTCAO00442 366 aaKnown RBP16.51■□□□□ 0.23
FOXN3-204ENST00000553840 CCL21O00585 134 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 ZG16O60844 167 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 ITGA10O75578 1167 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 SCELO95171 688 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 PTX3P26022 381 aaPredicted RBP16.51■□□□□ 0.23
FOXN3-204ENST00000553840 CNTFP26441 200 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 TLX1P31314 330 aaPredicted RBP16.51■□□□□ 0.23
FOXN3-204ENST00000553840 ARL1P40616 181 aaPredicted RBP16.51■□□□□ 0.23
FOXN3-204ENST00000553840 CA7P43166 264 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 SSR4P51571 173 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 BIKQ13323 160 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 OR4C11Q6IEV9 310 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 ZNF793Q6ZN11 406 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 UBE3DQ7Z6J8 389 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 CYP4Z2PQ8N1L4 340 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 POGLUT1Q8NBL1 392 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 NOA1Q8NC60 698 aaKnown RBP16.51■□□□□ 0.23
FOXN3-204ENST00000553840 HUS1BQ8NHY5 278 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 SLC44A1Q8WWI5 657 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 ATP6V1E2Q96A05 226 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 OR51B5Q9H339 312 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 IPPKQ9H8X2 491 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 KCMF1Q9P0J7 381 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 PHF11Q9UIL8 331 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 CLDN16Q9Y5I7 305 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 CROCCQ5TZA2 2017 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 MYO7BQ6PIF6 2116 aa16.51■□□□□ 0.23
FOXN3-204ENST00000553840 NPIPA5E9PKD4 350 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 H0YIV9 168 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 TGFBR3LH3BV60 316 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 SAP18O00422 153 aaKnown RBP16.5■□□□□ 0.23
FOXN3-204ENST00000553840 DYRK3O43781 588 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 SLC19A2O60779 497 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 LDB3O75112 727 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 COX7A2P14406 83 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 ZNF24P17028 368 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 PPP2R1BP30154 601 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 GPR143P51810 404 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 SLAMF1Q13291 335 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 TSNAXIP1Q2TAA8 658 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 HSDL2Q6YN16 418 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 SCYL1Q96KG9 808 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 PAFAH2Q99487 392 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 MTERF1Q99551 399 aaKnown RBP16.5■□□□□ 0.23
FOXN3-204ENST00000553840 DMRT3Q9NQL9 472 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 COPS7AQ9UBW8 275 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 NPIPA1Q9UND3 350 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 ERVK-11Q9UQG0 969 aa16.5■□□□□ 0.23
FOXN3-204ENST00000553840 MAST4O15021 2626 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 A0A087WUV0 522 aaPredicted RBP16.49■□□□□ 0.23
FOXN3-204ENST00000553840 C17orf105B2RV13 164 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 POC1B-GALNT4F8VUJ3 575 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 ASNA1O43681 348 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 SMIM24O75264 130 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 CLDN9O95484 217 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 ESRRAP11474 423 aaPredicted RBP16.49■□□□□ 0.23
FOXN3-204ENST00000553840 COL6A2P12110 1019 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 COL8A1P27658 744 aa16.49■□□□□ 0.23
FOXN3-204ENST00000553840 CPSF6Q16630 551 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms