RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 GPC6Q9Y625 555 aaPredicted RBP6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 AP1M2Q9Y6Q5 423 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 ENPP4Q9Y6X5 453 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 CKAP5Q14008 2032 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 CXorf51AA0A1B0GTR3 108 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 A0A1W2PRB8 838 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 ISPDA4D126 451 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 CTDSP2O14595 271 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 HAT1O14929 419 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 ENTPD6O75354 484 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 BCHEP06276 602 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 C1GALT1C1LP0DN25 315 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 CKMT1AP12532 417 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 LAG3P18627 525 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 IRS1P35568 1242 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 NR4A2P43354 598 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 DSTNP60981 165 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 RBBP4Q09028 425 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 DMC1Q14565 340 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 TCEAL5Q5H9L2 206 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 CNKSR3Q6P9H4 555 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 LILRA6Q6PI73 481 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 C19orf48Q6RUI8 117 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 FAM83HQ6ZRV2 1179 aaPredicted RBP6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 GDPD3Q7L5L3 318 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 OLIG3Q7RTU3 272 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF367Q7RTV3 350 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 TRAPPC5Q8IUR0 188 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF547Q8IVP9 402 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLC44A2Q8IWA5 706 aaPredicted RBP6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLAIN1Q8ND83 568 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 VANGL1Q8TAA9 524 aaPredicted RBP6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLC5A11Q8WWX8 675 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 TIFAQ96CG3 184 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 DEFB118Q96PH6 123 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 MGLLQ99685 303 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 ACAT2Q9BWD1 397 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 HHATLQ9HCP6 504 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 SPHK2Q9NRA0 654 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 KCND3Q9UK17 655 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 HCN4Q9Y3Q4 1203 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 DYRK1BQ9Y463 629 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 PRKAB1Q9Y478 270 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 PCDHGB6Q9Y5F9 930 aa6.61□□□□□ -1.35
LINC-ROR-201ENST00000553704 DSPPQ9NZW4 1301 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 MUC22E2RYF6 1773 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 SAGE2PA6NJ88 616 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 FOXE1O00358 373 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 SNPHO15079 494 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 OXSR1O95747 527 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 SYN1P17600 705 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 XPAP23025 273 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CASP3P42574 277 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 SLC15A1P46059 708 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CRISP1P54107 249 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 NTHL1P78549 312 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 TEKQ02763 1124 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 NFE2L1Q14494 772 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF630Q2M218 657 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 FBXO43Q4G163 708 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF805Q5CZA5 627 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 DEPDC1Q5TB30 811 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 TRIM40Q6P9F5 258 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 TUBA3EQ6PEY2 450 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PAQR6Q6TCH4 344 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PTCHD4Q6ZW05 846 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 HMGN2P46Q86SG4 172 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CCDC190Q86UF4 302 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 AKAP14Q86UN6 197 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 KREMEN2Q8NCW0 462 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 RAB8BQ92930 207 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 UCN3Q969E3 161 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 TMEM19Q96HH6 336 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 FOPNLQ96NB1 174 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 EFCAB11Q9BUY7 163 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CDCA4Q9BXL8 241 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF717Q9BY31 904 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 BARHL1Q9BZE3 327 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 SERHL2Q9H4I8 314 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ZNF556Q9HAH1 456 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ERVK13-1Q9NX77 482 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 REV1Q9UBZ9 1251 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ANGPT4Q9Y264 503 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 LSM2Q9Y333 95 aaKnown RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 A3GALT2U3KPV4 340 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 MYO7AQ13402 2215 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 A8MVJ9 347 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 H3BQ06 376 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 WWP2O00308 870 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 KPNA3O00505 521 aaPredicted RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PLPP1O14494 284 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 CSO75390 466 aaKnown RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 FGF18O76093 207 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PTTG1O95997 202 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 IFNW1P05000 195 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ITGA2P17301 1181 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 POLR2EP19388 210 aaKnown RBP6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 ITGB8P26012 769 aa6.6□□□□□ -1.35
LINC-ROR-201ENST00000553704 PTX3P26022 381 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms