RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 MED17Q9NVC6 651 aa4.36□□□□□ -1.71
SYNE2-210ENST00000553455 TECRQ9NZ01 308 aaKnown RBP4.36□□□□□ -1.71
SYNE2-210ENST00000553455 TEKT2Q9UIF3 430 aa4.36□□□□□ -1.71
SYNE2-210ENST00000553455 MRPS18CQ9Y3D5 142 aaKnown RBP4.36□□□□□ -1.71
SYNE2-210ENST00000553455 BICDL2A1A5D9 508 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 SH3PXD2BA1X283 911 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 TCP10L2B9ZVM9 353 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 OGTO15294 1046 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 TNFSF12O43508 249 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 TXNDC12O95881 172 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 GSTA2P09210 222 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 GAP43P17677 238 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 FCARP24071 287 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 PDHA2P29803 388 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 NSFP46459 744 aaKnown RBP4.35□□□□□ -1.71
SYNE2-210ENST00000553455 FHITP49789 147 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 IL1RL1Q01638 556 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 WASHC5Q12768 1159 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 C3P1Q6ZMU1 363 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 Q6ZTC4 211 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 C17orf64Q86WR6 236 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 OR4N5Q8IXE1 308 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 BATF2Q8N1L9 274 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 ZNF248Q8NDW4 579 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 LIPHQ8WWY8 451 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 PCED1BQ96HM7 432 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 CXorf58Q96LI9 332 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 GPR137Q96N19 417 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 PINK1Q9BXM7 581 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 XPO4Q9C0E2 1151 aaKnown RBP4.35□□□□□ -1.71
SYNE2-210ENST00000553455 WWP1Q9H0M0 922 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 CXXC4Q9H2H0 198 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 MARCH7Q9H992 704 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 NLGN3Q9NZ94 848 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 NINJ2Q9NZG7 142 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 MDFICQ9P1T7 246 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 ASIC3Q9UHC3 531 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 NARFQ9UHQ1 456 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 ODF2LQ9ULJ1 636 aa4.35□□□□□ -1.71
SYNE2-210ENST00000553455 EXOGQ9Y2C4 368 aaKnown RBP4.35□□□□□ -1.71
SYNE2-210ENST00000553455 KIF26BQ2KJY2 2108 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 CCSO14618 274 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 LRP3O75074 770 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 ATP6V1G1O75348 118 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 CSDE1O75534 798 aaKnown RBP4.34□□□□□ -1.71
SYNE2-210ENST00000553455 CXCL10P02778 98 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 SFTPBP07988 381 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 TPBGLP0DKB5 382 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 ACP1P24666 158 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 SFNP31947 248 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 STIP1P31948 543 aaKnown RBP4.34□□□□□ -1.71
SYNE2-210ENST00000553455 TNFRSF4P43489 277 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 HSPA14Q0VDF9 509 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 PPP1R8Q12972 351 aaKnown RBP4.34□□□□□ -1.71
SYNE2-210ENST00000553455 NKAIN2Q5VXU1 208 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 NEPROQ6NW34 567 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 MRPL43Q8N983 215 aaKnown RBP4.34□□□□□ -1.71
SYNE2-210ENST00000553455 CCNYQ8ND76 341 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 NUP37Q8NFH4 326 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 OR10G7Q8NGN6 311 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 HCAR2Q8TDS4 363 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 C11orf52Q96A22 123 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 TMEM186Q96B77 213 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 CDHR1Q96JP9 859 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 JPH2Q9BR39 696 aaPredicted RBP4.34□□□□□ -1.71
SYNE2-210ENST00000553455 GANQ9H2C0 597 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 IL1RAPQ9NPH3 570 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 B3GAT2Q9NPZ5 323 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 DNPEPQ9ULA0 475 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 ZHX2Q9Y6X8 837 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 CNTNAP2Q9UHC6 1331 aa4.34□□□□□ -1.71
SYNE2-210ENST00000553455 NPC1L1Q9UHC9 1359 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 LOC105371242A0A075B767 164 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 IGHV3-38A0A0C4DH36 116 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 KRT87PA6NCN2 255 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 HSF2BPO75031 334 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 MTRF1O75570 445 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 SERPINF2P08697 491 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 PCP11498 1178 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF18P17022 549 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 RABIFP47224 123 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 NDST2P52849 883 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 GEMP55040 296 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 CALCOCO2Q13137 446 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 RIGQ13278 110 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 ZNF177Q13360 481 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 MTHFSDQ2M296 383 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 RFTN2Q52LD8 501 aaPredicted RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 NEK5Q6P3R8 708 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 MIER3Q7Z3K6 550 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 ITIH5Q86UX2 942 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 HDDC3Q8N4P3 179 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 AQP11Q8NBQ7 271 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 OR6M1Q8NGM8 313 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 RAB39BQ96DA2 213 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 ATXN7L3BQ96GX2 97 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 RAB40CQ96S21 281 aa4.33□□□□□ -1.72
SYNE2-210ENST00000553455 DDX47Q9H0S4 455 aaKnown RBP4.33□□□□□ -1.72
SYNE2-210ENST00000553455 ABCG4Q9H172 646 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms