RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 OR4F6Q8NGB9 312 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 TANKQ92844 425 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 DAZLQ92904 295 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 NSUN5Q96P11 429 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 CDK15Q96Q40 435 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 MAPKAP1Q9BPZ7 522 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 DDX31Q9H8H2 851 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 ADAP2Q9NPF8 381 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 PNO1Q9NRX1 252 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 PLA2G3Q9NZ20 509 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 VTI1BQ9UEU0 232 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 PPIEQ9UNP9 301 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 CLCA3PQ9Y6N3 262 aa14.36□□□□□ -0.11
SHMT2-204ENST00000553324 TNRC6AQ8NDV7 1962 aaKnown RBP14.36□□□□□ -0.11
SHMT2-204ENST00000553324 A0A1W2PPM1 405 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 DLX3O60479 287 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 MYO1DO94832 1006 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 IFNA16P05015 189 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 TUBBP07437 444 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 CRHR1P34998 444 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 BUD31P41223 144 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 SLCO1A2P46721 670 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 NEK2P51955 445 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 CDH13P55290 713 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 VSNL1P62760 191 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 TRAF3Q13114 568 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 ELAVL1Q15717 326 aaKnown RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 INAQ16352 499 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 CYP20A1Q6UW02 462 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 SH2D5Q6ZV89 423 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 PAGE2Q7Z2X7 111 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 RPS19BP1Q86WX3 136 aaKnown RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 NFAM1Q8NET5 270 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 TRPC4APQ8TEL6 797 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 MTFMTQ96DP5 389 aaKnown RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 BARD1Q99728 777 aaKnown RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 UTP23Q9BRU9 249 aaKnown RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 ALOXE3Q9BYJ1 711 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 DEFB126Q9BYW3 111 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 ROPN1BQ9BZX4 212 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 ROPN1Q9HAT0 212 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 BRF2Q9HAW0 419 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 LYARQ9NX58 379 aaKnown RBP14.35□□□□□ -0.11
SHMT2-204ENST00000553324 TRPS1Q9UHF7 1281 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 FBXW2Q9UKT8 454 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 PCDHGB6Q9Y5F9 930 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 CSAG2Q9Y5P2 127 aa14.35□□□□□ -0.11
SHMT2-204ENST00000553324 NUP210LQ5VU65 1888 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 CCDC151A5D8V7 595 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 A8MUA0 341 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 H3BQF6 201 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 PROM1O43490 865 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 DYRK3O43781 588 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 NUDT17P0C025 328 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 HNRNPFP52597 415 aaKnown RBP14.34□□□□□ -0.11
SHMT2-204ENST00000553324 IFFO1Q0D2I5 559 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 UNC50Q53HI1 259 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 NUDT13Q86X67 352 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 CRLF3Q8IUI8 442 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 RNF175Q8N4F7 328 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 TMEM52Q8NDY8 209 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 L3HYPDHQ96EM0 354 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 VMP1Q96GC9 406 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 RBM18Q96H35 190 aaKnown RBP14.34□□□□□ -0.11
SHMT2-204ENST00000553324 ZNF382Q96SR6 550 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 CSF3RQ99062 836 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 CDCP1Q9H5V8 836 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 RPF2Q9H7B2 306 aaKnown RBP14.34□□□□□ -0.11
SHMT2-204ENST00000553324 WDR41Q9HAD4 459 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 ASF1BQ9NVP2 202 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 ADAM29Q9UKF5 820 aa14.34□□□□□ -0.11
SHMT2-204ENST00000553324 ARHGAP10A1A4S6 786 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 SMIM23A6NLE4 172 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 FCHO1O14526 889 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 COPEO14579 308 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 PRAMEF2O60811 474 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 GUCY1B2O75343 617 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 ZFAND5O76080 213 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 KRT6AP02538 564 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 KRT6BP04259 564 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 FAM58BPP0C7Q3 252 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 MYL2P10916 166 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 COX7A2P14406 83 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 KRT4P19013 534 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 TNNI3P19429 210 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 BSGP35613 385 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 KRT6CP48668 564 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 PKNOX1P55347 436 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 MRM1Q6IN84 353 aaKnown RBP14.33□□□□□ -0.12
SHMT2-204ENST00000553324 LETMD1Q6P1Q0 360 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 FAM180AQ6UWF9 173 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 CLNKQ7Z7G1 428 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 BEST3Q8N1M1 668 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 ARMC10Q8N2F6 343 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 BCORP1Q8N888 145 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 MORN4Q8NDC4 146 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 OR14A16Q8NHC5 309 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 RDH11Q8TC12 318 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 EPS8L3Q8TE67 593 aaKnown RBP14.33□□□□□ -0.12
SHMT2-204ENST00000553324 SELENOMQ8WWX9 145 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms