RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TMEM132CQ8N3T6 1108 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 GOLM1Q8NBJ4 401 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 FAM222BQ8WU58 562 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 PTPMT1Q8WUK0 201 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 MAIP1Q8WWC4 291 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 ATL1Q8WXF7 558 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 CCT6BQ92526 530 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 MS4A6EQ96DS6 147 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 FAR2Q96K12 515 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 C18orf12Q96KH6 178 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 SIGLEC10Q96LC7 697 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 QRFPRQ96P65 431 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 TRIM54Q9BYV2 358 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 OR8D2Q9GZM6 311 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 SLC6A15Q9H2J7 730 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 ZNF703Q9H7S9 590 aaPredicted RBP8.39□□□□□ -1.07
SYNE2-209ENST00000553308 EDARQ9UNE0 448 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 SLC22A14Q9Y267 594 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 CLCA3PQ9Y6N3 262 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 ARHGAP21Q5T5U3 1957 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 NCKAP5O14513 1909 aa8.39□□□□□ -1.07
SYNE2-209ENST00000553308 LRIT2A6NDA9 550 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 FAM47E-STBD1D6RA91 191 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 CYR61O00622 381 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 B3GALT2O43825 422 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 HCN1O60741 890 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 BANF1O75531 89 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 AHSGP02765 367 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 ENO2P09104 434 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 INHBBP09529 407 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 CCDC175P0C221 793 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 RFPL3SP0C7P2 107 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 GABRA1P14867 456 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 CERS1P27544 350 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 ADSLP30566 484 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 CXCR5P32302 372 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 PEX19P40855 299 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 ASCL1P50553 236 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 PLA2G16P53816 162 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 LIM2P55344 173 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 RNF4P78317 190 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 KEAP1Q14145 624 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 SLBPQ14493 270 aaKnown RBP eCLIP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 PPP1R3AQ16821 1122 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 C18orf21Q32NC0 220 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 BBS9Q3SYG4 887 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 PRAMEF20Q5VT98 475 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 FBXW10Q5XX13 1052 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 ADGRD1Q6QNK2 874 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 OPN5Q6U736 354 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 CLEC9AQ6UXN8 241 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 TAOK1Q7L7X3 1001 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 ZNF595Q8IYB9 648 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 KLHDC8AQ8IYD2 350 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 ULK2Q8IYT8 1036 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 GPATCH11Q8N954 259 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 MORN4Q8NDC4 146 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 TNIP2Q8NFZ5 429 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 SLC2A12Q8TD20 617 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 DAZLQ92904 295 aaKnown RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 RNASE6Q93091 150 aaKnown RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 CAPZA3Q96KX2 299 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 SGCZQ96LD1 299 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 NPLQ9BXD5 320 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 ALOXE3Q9BYJ1 711 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 MRPS33Q9Y291 106 aaKnown RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 KCNE2Q9Y6J6 123 aa8.38□□□□□ -1.07
SYNE2-209ENST00000553308 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 FLNAP21333 2647 aaKnown RBP8.38□□□□□ -1.07
SYNE2-209ENST00000553308 NPEPPSL1A6NEC2 478 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 LRRC3CA6NJW4 275 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 HSPB2A8KAH6 182 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 C17orf105B2RV13 164 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 CDC7O00311 574 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 DVL2O14641 736 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 LDB3O75112 727 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 ETHE1O95571 254 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 TBX6O95947 436 aaPredicted RBP8.37□□□□□ -1.07
SYNE2-209ENST00000553308 PGAM1P18669 254 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 HOXC12P31275 282 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 TRPC1P48995 793 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 ID2Q02363 134 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 ASPHQ12797 758 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 DAZAP2Q15038 168 aaPredicted RBP8.37□□□□□ -1.07
SYNE2-209ENST00000553308 HSPB2Q16082 182 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 FBXL19-AS1Q494R0 122 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 ADNP2Q6IQ32 1131 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 SLCO4C1Q6ZQN7 724 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 CHSY3Q70JA7 882 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 VN1R5Q7Z5H4 357 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 PRIMA1Q86XR5 153 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 CNTN4Q8IWV2 1026 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 FBXW8Q8N3Y1 598 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 NAT8LQ8N9F0 302 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 OR8K3Q8NH51 312 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 OR14A16Q8NHC5 309 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 NEIL3Q8TAT5 605 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 ARSGQ96EG1 525 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 RUNDC3BQ96NL0 473 aa8.37□□□□□ -1.07
SYNE2-209ENST00000553308 PLEKHF2Q9H8W4 249 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms