RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 PSPHP78330 225 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 RHAGQ02094 409 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ELAVL1Q15717 326 aaKnown RBP9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 SMU1Q2TAY7 513 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 SPDYAQ5MJ70 313 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 OR52E8Q6IFG1 317 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 GALNT18Q6P9A2 607 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 IKBIPQ70UQ0 350 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 VN1R5Q7Z5H4 357 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 CUZD1Q86UP6 607 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 SPNS2Q8IVW8 549 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 PRSS58Q8IYP2 241 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ZADH2Q8N4Q0 377 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ARFGAP2Q8N6H7 521 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 NATD1Q8N6N6 113 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 EFCAB3Q8N7B9 438 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 OR14A16Q8NHC5 309 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ZNF354BQ96LW1 612 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 PPP3R2Q96LZ3 170 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 CDK15Q96Q40 435 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 MACROD1Q9BQ69 325 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 GATA5Q9BWX5 397 aaPredicted RBP9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 MMP25Q9NPA2 562 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 EHD3Q9NZN3 535 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 COPS7AQ9UBW8 275 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 ANAPC2Q9UJX6 822 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 TRAF6Q9Y4K3 522 aa9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 HEMK1Q9Y5R4 338 aaPredicted RBP9.66□□□□□ -0.86
TRAFD1-208ENST00000552890 CHD6Q8TD26 2715 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 IGHV1-45A0A0A0MS14 117 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 GNG14A0A1W2PPG7 69 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 TCRBV16S1A1N1A0A5B0 115 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 TMEM120BA0PK00 339 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ZNF860A6NHJ4 632 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 CYR61O00622 381 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 PROM1O43490 865 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 CNOT3O75175 753 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 SLITRK5O94991 958 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 MED26O95402 600 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 GPR75O95800 540 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 STATHP02808 62 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 IFNA16P05015 189 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 WT1P19544 449 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 PRPH2P23942 346 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 CERS1P27544 350 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 PIK3R1P27986 724 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 BSGP35613 385 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ASMTP46597 345 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 CCL11P51671 97 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 MAT1AQ00266 395 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 TNFRSF17Q02223 184 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 TBL3Q12788 808 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 STX3Q13277 289 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 SGO1Q5FBB7 561 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ARL13AQ5H913 290 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 MRM1Q6IN84 353 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 IGFL3Q6UXB1 125 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ISLR2Q6UXK2 745 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 PRSS41Q7RTY9 318 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 COMMD6Q7Z4G1 85 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ANKRD37Q7Z713 158 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 SCUBE1Q8IWY4 988 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ST13P4Q8IZP2 240 aaPredicted RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 TEX19Q8NA77 164 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 MORN4Q8NDC4 146 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 OR5L2Q8NGL0 311 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 OR8K3Q8NH51 312 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 SUN3Q8TAQ9 357 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 CHTF18Q8WVB6 975 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 TLCD1Q96CP7 247 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ERP27Q96DN0 273 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 MTFMTQ96DP5 389 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ATP6V1G3Q96LB4 118 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 SMAD5Q99717 465 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 PAIP2Q9BPZ3 127 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 LANCL2Q9NS86 450 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 THAP1Q9NVV9 213 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 KCMF1Q9P0J7 381 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 SLC17A7Q9P2U7 560 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 VTI1BQ9UEU0 232 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 CFL2Q9Y281 166 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 MRPS2Q9Y399 296 aaKnown RBP9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 RAP2CQ9Y3L5 183 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 ZNF780BQ9Y6R6 833 aa9.65□□□□□ -0.86
TRAFD1-208ENST00000552890 LAMA5O15230 3695 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 FER1L5A0AVI2 2057 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 IGKV3D-11A0A0A0MRZ8 115 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 A0A0A6YYD5 115 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 SAGE2PA6NJ88 616 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 TRPC5OSA6NMA1 111 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 FCHO1O14526 889 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 OR10H2O60403 315 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 BCAS2O75934 225 aaPredicted RBP9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 SOX30O94993 753 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 KLK1P06870 262 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 PRR35P0CG20 571 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 DHRS4L1P0CG22 281 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 COX6A1P12074 109 aa9.64□□□□□ -0.87
TRAFD1-208ENST00000552890 TNNI3P19429 210 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms