RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 VPS11Q9H270 941 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 RNF112Q9ULX5 631 aa11.05□□□□□ -0.64
CKAP4-202ENST00000552828 IQANK1A0A1B0GTG1 560 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 CCDC189A1A4V9 331 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 TFECO14948 347 aaPredicted RBP11.04□□□□□ -0.64
CKAP4-202ENST00000552828 PEX1O43933 1283 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 KLHL2O95198 593 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 S100BP04271 92 aaPredicted RBP11.04□□□□□ -0.64
CKAP4-202ENST00000552828 RNH1P13489 461 aaKnown RBP11.04□□□□□ -0.64
CKAP4-202ENST00000552828 TFEBP19484 476 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 GMPRP36959 345 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 MAGEA12P43365 314 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 GPR143P51810 404 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 REEP5Q00765 189 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 DLG1Q12959 904 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 ACAP2Q15057 778 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 OR4D1Q15615 310 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 TMEM211Q6ICI0 200 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 KLC3Q6P597 504 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 CD163Q86VB7 1156 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 CENPLQ8N0S6 344 aaPredicted RBP11.04□□□□□ -0.64
CKAP4-202ENST00000552828 CYP4X1Q8N118 509 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 TCAIMQ8N3R3 496 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 ANKRD53Q8N9V6 530 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 ARMC2Q8NEN0 867 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 TRPV3Q8NET8 790 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 B3GNT7Q8NFL0 401 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 CREB3L4Q8TEY5 395 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 KCTD4Q8WVF5 259 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 ASB5Q8WWX0 329 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 ISL2Q96A47 359 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 RHBDF1Q96CC6 855 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 NXNL1Q96CM4 212 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 PARD6BQ9BYG5 372 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 SPNS1Q9H2V7 528 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 ALG9Q9H6U8 611 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 PPCSQ9HAB8 311 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 PELI2Q9HAT8 420 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 NECTIN3Q9NQS3 549 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 NPDC1Q9NQX5 325 aaPredicted RBP11.04□□□□□ -0.64
CKAP4-202ENST00000552828 CD274Q9NZQ7 290 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 PSMC3IPQ9P2W1 217 aaPredicted RBP11.04□□□□□ -0.64
CKAP4-202ENST00000552828 TNFRSF10DQ9UBN6 386 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 MMACHCQ9Y4U1 282 aa11.04□□□□□ -0.64
CKAP4-202ENST00000552828 SCN3AQ9NY46 2000 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 URADA6NGE7 173 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 NCF1BA6NI72 391 aaPredicted RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 SYCE1LA8MT33 242 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 NCF1CA8MVU1 366 aaPredicted RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 FOXO6A8MYZ6 492 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 PSMD12O00232 456 aaPredicted RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 HS6ST1O60243 411 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 KERAO60938 352 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 TOXO94900 526 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 SERPIND1P05546 499 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 TPOP07202 933 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 SERPINA6P08185 405 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 COL6A2P12110 1019 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 NCF1P14598 390 aaPredicted RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 GCAP28676 217 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 CHRNB4P30926 498 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 HSD17B3P37058 310 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 CLCN2P51788 898 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 RAB8AP61006 207 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 IRF9Q00978 393 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 EMC4Q5J8M3 183 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 SULT1C3Q6IMI6 304 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 ARHGAP11AQ6P4F7 1023 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 TIFABQ6ZNK6 161 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 MDGA2Q7Z553 956 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 THOC6Q86W42 341 aaKnown RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 SCUBE1Q8IWY4 988 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 CYP4Z2PQ8N1L4 340 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 CA13Q8N1Q1 262 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 RHEBL1Q8TAI7 183 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 AENQ8WTP8 325 aaKnown RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 TSNARE1Q96NA8 513 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 AICDAQ9GZX7 198 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 TP63Q9H3D4 680 aaPredicted RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 KLHL31Q9H511 634 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 CNOT10Q9H9A5 744 aaKnown RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 WWOXQ9NZC7 414 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 ZNF223Q9UK11 482 aaPredicted RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 SLC22A14Q9Y267 594 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 DYRK1BQ9Y463 629 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 CLDN16Q9Y5I7 305 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 KCNE2Q9Y6J6 123 aa11.03□□□□□ -0.64
CKAP4-202ENST00000552828 ZNF469Q96JG9 3925 aaPredicted RBP11.03□□□□□ -0.64
CKAP4-202ENST00000552828 GTF3C1Q12789 2109 aa11.02□□□□□ -0.64
CKAP4-202ENST00000552828 TRBV11-1A0A0K0K1C0 115 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 SUPT3HB4E1H0 165 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 C4orf51C9J302 202 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 SUPT3HO75486 399 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 ITGA10O75578 1167 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 SHBGP04278 402 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 RBP1P09455 135 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 MSX1P28360 303 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 GGT5P36269 586 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 RFC3P40938 356 aa11.02□□□□□ -0.65
CKAP4-202ENST00000552828 KCNC1P48547 511 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms