RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 C7orf57Q8NEG2 295 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 OR14A16Q8NHC5 309 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 GIMAP7Q8NHV1 300 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 CNIH4Q9P003 139 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 PDE10AQ9Y233 779 aa14.08□□□□□ -0.16
CACNB3-220ENST00000551716 A0A088AWK7 358 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 PABPN1LA6NDY0 278 aaKnown RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 MIF4GDA9UHW6 222 aaKnown RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 ERN1O75460 977 aaKnown RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 CNOT4O95628 575 aaKnown RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 ZNF10P21506 573 aaPredicted RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 PIGAP37287 484 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 RGS4P49798 205 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 OASLQ15646 514 aaKnown RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 ACKR1Q16570 336 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 DUPD1Q68J44 220 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 UGT3A1Q6NUS8 523 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 CES3Q6UWW8 571 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 SYDE1Q6ZW31 735 aaPredicted RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 KIAA1191Q96A73 305 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 PERPQ96FX8 193 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 TIMP4Q99727 224 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 CCL19Q99731 98 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 RBM24Q9BX46 236 aaKnown RBP14.07□□□□□ -0.16
CACNB3-220ENST00000551716 CALHM2Q9HA72 323 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 VTI1BQ9UEU0 232 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 AMFRQ9UKV5 643 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 SOX13Q9UN79 622 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 TFR2Q9UP52 801 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 MAD1L1Q9Y6D9 718 aa14.07□□□□□ -0.16
CACNB3-220ENST00000551716 MBD3L4A6NDZ8 208 aaPredicted RBP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 MBD3L5A6NJ08 208 aaPredicted RBP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 LIASO43766 372 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 CTNSO60931 367 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 F12P00748 615 aaPredicted RBP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 RFPL3SP0C7P2 107 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 TNNI3P19429 210 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 PPP2R1BP30154 601 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 RPL22P35268 128 aaKnown RBP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 STXBP1P61764 594 aaKnown RBP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 EEF1A1P68104 462 aaKnown RBP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 BTN3A2P78410 334 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 CCZ1BP86790 482 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 CCZ1P86791 482 aaPredicted RBP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 DUSP8Q13202 625 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 EFTUD2Q15029 972 aaKnown RBP eCLIP14.06□□□□□ -0.16
CACNB3-220ENST00000551716 PIGGQ5H8A4 983 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 EEF1A1P5Q5VTE0 462 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 C20orf204Q6ZNR8 217 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 PEX26Q7Z412 305 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 CPNE9Q8IYJ1 553 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 SLC15A4Q8N697 577 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 SLC22A8Q8TCC7 542 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 CD200R1Q8TD46 325 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 PAQR8Q8TEZ7 354 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 ATL1Q8WXF7 558 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 GPR21Q99679 349 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 AIF1LQ9BQI0 150 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 GSX2Q9BZM3 304 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 OR8D2Q9GZM6 311 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 PRDM14Q9GZV8 571 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 SLC6A15Q9H2J7 730 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 KLHL31Q9H511 634 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 COPS7AQ9UBW8 275 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 MED16Q9Y2X0 877 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 CLDN16Q9Y5I7 305 aa14.06□□□□□ -0.16
CACNB3-220ENST00000551716 TCRBV7S2A1N4TA0A589 114 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 MBD3L3A6NE82 208 aaPredicted RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 BTNL10A8MVZ5 291 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 MGAT1P26572 445 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 CPA2P48052 419 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 TRPC1P48995 793 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 RAB38P57729 211 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 CDK16Q00536 496 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 CRYZQ08257 329 aaKnown RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 STX4Q12846 297 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 CTBP1Q13363 440 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 THOC5Q13769 683 aaKnown RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 ZNF791Q3KP31 576 aaPredicted RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 ZNF470Q6ECI4 717 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 HEPHL1Q6MZM0 1159 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 LRRC57Q8N9N7 239 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 OR56A3Q8NH54 315 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 MBD3L2Q8NHZ7 208 aaPredicted RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 GABPB2Q8TAK5 448 aaPredicted RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 PTPMT1Q8WUK0 201 aaPredicted RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 SLC5A11Q8WWX8 675 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 ATG4AQ8WYN0 398 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 TRIM54Q9BYV2 358 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 SH2D2AQ9NP31 389 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 TRMT1Q9NXH9 659 aaKnown RBP14.05□□□□□ -0.16
CACNB3-220ENST00000551716 ADAMTS6Q9UKP5 1117 aa14.05□□□□□ -0.16
CACNB3-220ENST00000551716 MAGEB16A2A368 324 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 B3GALT2O43825 422 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 NRDCO43847 1150 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 IPO7O95373 1038 aaKnown RBP14.04□□□□□ -0.16
CACNB3-220ENST00000551716 C1QAP02745 245 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 ETS1P14921 441 aa14.04□□□□□ -0.16
CACNB3-220ENST00000551716 HPDP32754 393 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms