RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 A0A0J9YY10 115 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 GCM2O75603 506 aaPredicted RBP18.66■□□□□ 0.58
SSH1-209ENST00000551165 RAP2AP10114 183 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 UQCRBP14927 111 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 CHI3L1P36222 383 aaPredicted RBP18.66■□□□□ 0.58
SSH1-209ENST00000551165 TRA2BP62995 288 aaKnown RBP18.66■□□□□ 0.58
SSH1-209ENST00000551165 CHRNB3Q05901 458 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 DEFB134Q4QY38 66 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 C6orf52Q5T4I8 152 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 OR52E4Q8NGH9 312 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 ZFYVE21Q9BQ24 234 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 EPS8L2Q9H6S3 715 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 PCDHGB5Q9Y5G0 923 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 A0A1B0GVT2 93 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 TXNDC9O14530 226 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 ACOX3O15254 700 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 BCAT2O15382 392 aaPredicted RBP18.66■□□□□ 0.58
SSH1-209ENST00000551165 TNFRSF21O75509 655 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 C8orf89P0DMQ9 161 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 FRKP42685 505 aaPredicted RBP18.66■□□□□ 0.58
SSH1-209ENST00000551165 ATP6AP1Q15904 470 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 DEFB110Q30KQ9 67 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 ZBTB49Q6ZSB9 765 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 ZCCHC7Q8N3Z6 543 aaKnown RBP18.66■□□□□ 0.58
SSH1-209ENST00000551165 CBR4Q8N4T8 237 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 GAL3ST3Q96A11 431 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 DUSP15Q9H1R2 295 aaPredicted RBP18.66■□□□□ 0.58
SSH1-209ENST00000551165 ANKMY1Q9P2S6 941 aa18.66■□□□□ 0.58
SSH1-209ENST00000551165 RNF103-CHMP3A0A140T963 221 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 UPK1AO00322 258 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 VILLO15195 856 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 ERAL1O75616 437 aaKnown RBP18.65■□□□□ 0.58
SSH1-209ENST00000551165 UBXN7O94888 489 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 ZNF682O95780 498 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 SLC35G6P0C7Q6 338 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 KDELR2P33947 212 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 OLR1P78380 273 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 ZXDAP98168 799 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 RGS1Q08116 209 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 OR52N2Q8NGI0 321 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 OR5P2Q8WZ92 322 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 GLIPR2Q9H4G4 154 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 SLC35C2Q9NQQ7 365 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 C1GALT1Q9NS00 363 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 POMT2Q9UKY4 750 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 FAF1Q9UNN5 650 aaPredicted RBP18.65■□□□□ 0.58
SSH1-209ENST00000551165 KLK4Q9Y5K2 254 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 MAGED1Q9Y5V3 778 aaPredicted RBP18.65■□□□□ 0.58
SSH1-209ENST00000551165 FRYLO94915 3013 aa18.65■□□□□ 0.58
SSH1-209ENST00000551165 TP53BP1Q12888 1972 aaPredicted RBP18.65■□□□□ 0.58
SSH1-209ENST00000551165 ZNF860A6NHJ4 632 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 PROM1O43490 865 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 KIF1CO43896 1103 aaKnown RBP18.64■□□□□ 0.58
SSH1-209ENST00000551165 SMIM10L1P0DMW3 83 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 DRD2P14416 443 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 FASLGP48023 281 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 IST1P53990 364 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 PPP1R8Q12972 351 aaKnown RBP18.64■□□□□ 0.58
SSH1-209ENST00000551165 BNIP3Q12983 259 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 GK3PQ14409 553 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 TBPL2Q6SJ96 375 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 VTCN1Q7Z7D3 282 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 TRIML2Q8N7C3 387 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 CATSPER1Q8NEC5 780 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 KLHL6Q8WZ60 621 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 CNRIP1Q96F85 164 aaPredicted RBP18.64■□□□□ 0.58
SSH1-209ENST00000551165 SMIM10Q96HG1 83 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 VPS50Q96JG6 964 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 UGT2B28Q9BY64 529 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 TAS2R7Q9NYW3 318 aa18.64■□□□□ 0.58
SSH1-209ENST00000551165 PCDH15Q96QU1 1955 aa18.64■□□□□ 0.57
SSH1-209ENST00000551165 LMO7DNF2Z398 122 aa18.64■□□□□ 0.57
SSH1-209ENST00000551165 CLOCKO15516 846 aa18.64■□□□□ 0.57
SSH1-209ENST00000551165 LDLRP01130 860 aa18.64■□□□□ 0.57
SSH1-209ENST00000551165 MYF5P13349 255 aa18.64■□□□□ 0.57
SSH1-209ENST00000551165 PPIBP23284 216 aaKnown RBP18.64■□□□□ 0.57
SSH1-209ENST00000551165 HNRNPKP61978 463 aaKnown RBP eCLIP18.64■□□□□ 0.572e-6■■■■■ 27.1
SSH1-209ENST00000551165 SRFBP1Q8NEF9 429 aaKnown RBP18.64■□□□□ 0.57
SSH1-209ENST00000551165 AMDHD1Q96NU7 426 aa18.64■□□□□ 0.57
SSH1-209ENST00000551165 CES1P1Q9UKY3 287 aa18.64■□□□□ 0.57
SSH1-209ENST00000551165 SCN2AQ99250 2005 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 CASC3O15234 703 aaKnown RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 PIAS2O75928 621 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 UQCRC2P22695 453 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 AFF3P51826 1226 aaKnown RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 RUNX2Q13950 521 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 TMEM214Q6NUQ4 689 aaKnown RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 ARMC6Q6NXE6 501 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 ERICH5Q6P6B1 374 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 RNF44Q7L0R7 432 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 RBM12BQ8IXT5 1001 aaKnown RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 PYURFQ96I23 114 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 FAIM2Q9BWQ8 316 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 SLC9B1P1A6NJY1 282 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 UBTFL6P0CB48 400 aaPredicted RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 FCGR1AP12314 374 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 FEN1P39748 380 aaKnown RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 C21orf59P57076 290 aa18.63■□□□□ 0.57
SSH1-209ENST00000551165 VSX2P58304 361 aaPredicted RBP18.63■□□□□ 0.57
SSH1-209ENST00000551165 IRGCQ6NXR0 463 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms