RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 LYRM4Q9HD34 91 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 ZNF469Q96JG9 3925 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-218ENST00000548945 NINQ8N4C6 2090 aa11.93□□□□□ -0.5
PTCH1-218ENST00000548945 A0A0G2JN53 185 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 A0A1B0GVC2 190 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 NKX2-6A6NCS4 301 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 FIGNL2A6NMB9 653 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 FAM90A27PA6NNH2 459 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 SUSD5O60279 629 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 IFNA16P05015 189 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 CNR1P21554 472 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 ACVR2AP27037 513 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 CASQ1P31415 396 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 SOX3P41225 446 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 GDF5P43026 501 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 KCNC1P48547 511 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 HK2P52789 917 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 PLA2G16P53816 162 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 NUP107P57740 925 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 CBLBQ13191 982 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 ZNF460Q14592 562 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 TGFBIQ15582 683 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 HYAL4Q2M3T9 481 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 KRTAP21-3Q3LHN1 58 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 HP1BP3Q5SSJ5 553 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-218ENST00000548945 CES4AQ5XG92 561 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 IL20RBQ6UXL0 311 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 RTL4Q6ZR62 310 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 CLYBLQ8N0X4 340 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 SLC35F6Q8N357 371 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 FAM109AQ8N4B1 249 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 RPRMLQ8N4K4 120 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 FAM47BQ8NA70 645 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 SRFBP1Q8NEF9 429 aaKnown RBP11.92□□□□□ -0.5
PTCH1-218ENST00000548945 MYRIPQ8NFW9 859 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 OR5L2Q8NGL0 311 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 OR5M3Q8NGP4 307 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 PTPMT1Q8WUK0 201 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-218ENST00000548945 ANKRD49Q8WVL7 239 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 ZNF592Q92610 1267 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 WDR34Q96EX3 536 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 PTCD3Q96EY7 689 aaKnown RBP11.92□□□□□ -0.5
PTCH1-218ENST00000548945 RUNDC3BQ96NL0 473 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 KCNC2Q96PR1 638 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 ZNF559Q9BR84 538 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 MCMBPQ9BTE3 642 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 ALOXE3Q9BYJ1 711 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 UCK2Q9BZX2 261 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 RHOJQ9H4E5 214 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 COPS7BQ9H9Q2 264 aaPredicted RBP11.92□□□□□ -0.5
PTCH1-218ENST00000548945 IL1RL2Q9HB29 575 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
PTCH1-218ENST00000548945 DNAJC11Q9NVH1 559 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 MOCS1Q9NZB8 636 aa11.92□□□□□ -0.5
PTCH1-218ENST00000548945 PRRC2AP48634 2157 aaKnown RBP11.91□□□□□ -0.5
PTCH1-218ENST00000548945 PINLYPA6NC86 204 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 FAM166BA8MTA8 275 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 NPIPA2E9PIF3 369 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 NPIPA3F8WFD2 350 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 WWP2O00308 870 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 CLGNO14967 610 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 KLK8O60259 260 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 TCP1P17987 556 aaKnown RBP11.91□□□□□ -0.5
PTCH1-218ENST00000548945 CERS1P27544 350 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 POU4F1Q01851 419 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 STX4Q12846 297 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 OPN5Q6U736 354 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 B3GNT6Q6ZMB0 384 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 C16orf47Q6ZP98 133 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-218ENST00000548945 TRILQ7L0X0 811 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 VN1R5Q7Z5H4 357 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 CLNKQ7Z7G1 428 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 CCDC71Q8IV32 467 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-218ENST00000548945 SCYL1Q96KG9 808 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 SMC6Q96SB8 1091 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 CSF3RQ99062 836 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 NAPGQ99747 312 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-218ENST00000548945 TTYH2Q9BSA4 534 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 EFCAB11Q9BUY7 163 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 PRDM7Q9NQW5 492 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 PNPLA3Q9NST1 481 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 SACM1LQ9NTJ5 587 aa11.91□□□□□ -0.5
PTCH1-218ENST00000548945 ZNF490Q9ULM2 529 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-218ENST00000548945 MPDZO75970 2070 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 A0A0G2JMM0 328 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 A0A1W2PPB8 328 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 A0A1W2PRS3 328 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 KIR3DP1A8MWS1 328 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 FAM47E-STBD1D6RA91 191 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 E7ESA3 106 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 AQP7O14520 342 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 HCN1O60741 890 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 WDR1O75083 606 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 STK16O75716 305 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 SEC31AO94979 1220 aaKnown RBP11.9□□□□□ -0.5
PTCH1-218ENST00000548945 WISP3O95389 354 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-218ENST00000548945 CASP2P42575 452 aa11.9□□□□□ -0.5
PTCH1-218ENST00000548945 ZFP36L2P47974 494 aaKnown RBP11.9□□□□□ -0.5
PTCH1-218ENST00000548945 NR0B1P51843 470 aaKnown RBP11.9□□□□□ -0.5
PTCH1-218ENST00000548945 SLC12A2P55011 1212 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms