RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PCBP3P57721 371 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 GPR50Q13585 617 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ARMC4Q5T2S8 1044 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF544Q6NX49 715 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 TNFAIP8L2Q6P589 184 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 FAM46DQ8NEK8 389 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CHAC2Q8WUX2 184 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 LMLNQ96KR4 655 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CCDC32Q9BV29 185 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 MMP28Q9H239 520 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 RC3H2Q9HBD1 1191 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 DYRK4Q9NR20 520 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CRNNQ9UBG3 495 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 SMIM30A4D0T7 59 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 TLR4O00206 839 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CTSAP10619 480 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 RHCEP18577 417 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CD72P21854 359 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ATN1P54259 1190 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 DAB2P98082 770 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 RBBP4Q09028 425 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 NDUFA5Q16718 116 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZDHHC20Q5W0Z9 365 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF517Q6ZMY9 492 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 HTR3DQ70Z44 454 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 RBM45Q8IUH3 476 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 LAS2Q8IYD9 372 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 SORCS1Q8WY21 1168 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 METTL2AQ96IZ6 378 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 WFDC6Q9BQY6 131 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CPEB1Q9BZB8 566 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 NDEL1Q9GZM8 345 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 CCL26Q9Y258 94 aa13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 LSM2Q9Y333 95 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-218ENST00000548919 A0A1W2PRB8 838 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 H3BN98 237 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 RGS13O14921 159 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 SOD2P04179 222 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 IL3P08700 152 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 HBQ1P09105 142 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 NPPBP16860 134 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 TIE1P35590 1138 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 CRYBB2P43320 205 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 ZNF630Q2M218 657 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 LIPKQ5VXJ0 399 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 TMEM25Q86YD3 366 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 C2orf73Q8N5S3 287 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 FLCNQ8NFG4 579 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 ST13P5Q8NFI4 369 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 OR2A12Q8NGT7 310 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLC6A16Q9GZN6 736 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLC25A19Q9HC21 320 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 DMRT3Q9NQL9 472 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 REV1Q9UBZ9 1251 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 SNX11Q9Y5W9 270 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 A0A075B6Q4 140 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 A0A1W2PRU2 124 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 A8MVJ9 347 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 KRT75O95678 551 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 ARAFP10398 606 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 CA8P35219 290 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 DMPKQ09013 629 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 SPHARQ15513 63 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 TOR1AIP1Q5JTV8 583 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 MPP7Q5T2T1 576 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 TMPRSS11AQ6ZMR5 421 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 VASH1Q7L8A9 365 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 NANOGNBQ7Z5D8 188 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 GPR65Q8IYL9 337 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 UBE2J2Q8N2K1 259 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 IQCF1Q8N6M8 205 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 TMEM203Q969S6 136 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 ST6GAL2Q96JF0 529 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLC6A18Q96N87 628 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 TTYH2Q9BSA4 534 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 CXorf36Q9H7Y0 433 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLC25A13Q9UJS0 675 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 ANGPT4Q9Y264 503 aa13.48□□□□□ -0.25
RAPGEF3-218ENST00000548919 KIAA1671Q9BY89 1806 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 A0A1W2PQ09 198 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 PIPSLA2A3N6 862 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 LEFTY2O00292 366 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 HOXC11O43248 304 aaPredicted RBP13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 LRRTM2O43300 516 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 LEFTY1O75610 366 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 CYP17A1P05093 508 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 BCHEP06276 602 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 FHP07954 510 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 DSTNP60981 165 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 MRPS15P82914 257 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 SREBF2Q12772 1141 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 SLAMF1Q13291 335 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 PDE7AQ13946 482 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 TRIM60Q495X7 471 aa13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 HENMT1Q5T8I9 393 aaKnown RBP13.47□□□□□ -0.25
RAPGEF3-218ENST00000548919 FAM71E1Q6IPT2 247 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms