RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ZNF473Q8WTR7 871 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 PTPMT1Q8WUK0 201 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 MTFMTQ96DP5 389 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 ATOH8Q96SQ7 321 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 CD244Q9BZW8 370 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 LYRM4Q9HD34 91 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 PLSCR2Q9NRY7 297 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 DEPPQ9NTK1 212 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 YARS2Q9Y2Z4 477 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 ADGRG4Q8IZF6 3080 aa16.17■□□□□ 0.18
CHMP1A-205ENST00000548650 A0A0G2JMM0 328 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 A0A1B0GTH9 108 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 A0A1W2PPB8 328 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 A0A1W2PRS3 328 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 KIR3DP1A8MWS1 328 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 RTCAO00442 366 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 CTNSO60931 367 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 OR6B1O95007 311 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 SCELO95171 688 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 TUBB4AP04350 444 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 SPRP35270 261 aaPredicted RBP16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 CASP2P42575 452 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 IRF8Q02556 426 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 RCN2Q14257 317 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 EFTUD2Q15029 972 aaKnown RBP eCLIP16.16■□□□□ 0.187e-7■■■■■ 28.4
CHMP1A-205ENST00000548650 ZDHHC24Q6UX98 284 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 ISCA2Q86U28 154 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 CD163Q86VB7 1156 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 GPALPP1Q8IXQ4 340 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 ZNF321PQ8N8H1 164 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 OR14A16Q8NHC5 309 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 ANP32BQ92688 251 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 DAZLQ92904 295 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 RASL10BQ96S79 203 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 MAPKAP1Q9BPZ7 522 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 ROGDIQ9GZN7 287 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 LIN28AQ9H9Z2 209 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 TIMMDC1Q9NPL8 285 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 IGSF5Q9NSI5 407 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 MYOTQ9UBF9 498 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 CLCA3PQ9Y6N3 262 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 PHF3Q92576 2039 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 CCDC168Q8NDH2 2452 aa16.16■□□□□ 0.18
CHMP1A-205ENST00000548650 MYOCOSA0A1B0GUC4 107 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 PINLYPA6NC86 204 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 A8MVJ9 347 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 CDC40O60508 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 KERAO60938 352 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 IFNA16P05015 189 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 HIST1H1TP22492 207 aaPredicted RBP16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 ATP5A1P25705 553 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 PTGS2P35354 604 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 SOX3P41225 446 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 HK2P52789 917 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 PCDH1Q08174 1060 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 BMPR2Q13873 1038 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 GRTP1Q5TC63 336 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 HSDL2Q6YN16 418 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 LAS2Q8IYD9 372 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 ZNF295-AS1Q8N0V1 137 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 EID3Q8N140 333 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 MARVELD2Q8N4S9 558 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 PPM1NQ8N819 430 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 ACOT4Q8N9L9 421 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 MORN4Q8NDC4 146 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 STAG3L4Q8TBR4 150 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 FBXO25Q8TCJ0 367 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 SREK1Q8WXA9 508 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 ASB15Q8WXK1 588 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 TBCDQ9BTW9 1192 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 OR8D2Q9GZM6 311 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 HPF1Q9NWY4 346 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 VTI1BQ9UEU0 232 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 PPT2Q9UMR5 302 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 ERVK-11Q9UQG0 969 aa16.15■□□□□ 0.18
CHMP1A-205ENST00000548650 C17orf105B2RV13 164 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 SUPT3HB4E1H0 165 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 UBXN8O00124 270 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 WWP2O00308 870 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 LDB3O75112 727 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 SUPT3HO75486 399 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 TPOP07202 933 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 ELAVL4P26378 380 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 SERPINB1P30740 379 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 STX2P32856 288 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 KIR3DL1P43629 444 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 NR0B1P51843 470 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 PLTPP55058 493 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 ID2Q02363 134 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 STX4Q12846 297 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 SERTAD2Q14140 314 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 TRADDQ15628 312 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 HIST2H2ACQ16777 129 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 TMEM35AQ53FP2 167 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 HIST2H2AA3Q6FI13 130 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 MED27Q6P2C8 311 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 RAPH1Q70E73 1250 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 CCDC25Q86WR0 208 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 ACBD4Q8NC06 268 aa16.14■□□□□ 0.17
CHMP1A-205ENST00000548650 SRFBP1Q8NEF9 429 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms