RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SERPIND1P05546 499 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 ANXA4P09525 319 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-227ENST00000548080 NQO1P15559 274 aaKnown RBP16.46■□□□□ 0.23
HDAC7-227ENST00000548080 TCN2P20062 427 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 CAPN3P20807 821 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 TACR1P25103 407 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 TIA1P31483 386 aaKnown RBP eCLIP16.46■□□□□ 0.23
HDAC7-227ENST00000548080 FOXL2P58012 376 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 CXADRP78310 365 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 RCAN2Q14206 197 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 VPS26BQ4G0F5 336 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 TCTE1Q5JU00 501 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 ARHGAP40Q5TG30 622 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 TLDC1Q6P9B6 456 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 COMMD6Q7Z4G1 85 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 CLHC1Q8NHS4 586 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 RERGQ96A58 199 aaPredicted RBP16.46■□□□□ 0.23
HDAC7-227ENST00000548080 SPDL1Q96EA4 605 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 THAP11Q96EK4 314 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 C10orf90Q96M02 699 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 TSSK3Q96PN8 268 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 F2RL3Q96RI0 385 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 NPAS2Q99743 824 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 CENPKQ9BS16 269 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 NDUFAF1Q9Y375 327 aa16.46■□□□□ 0.23
HDAC7-227ENST00000548080 MRPS2Q9Y399 296 aaKnown RBP16.46■□□□□ 0.23
HDAC7-227ENST00000548080 CACNA1BQ00975 2339 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 SCN3AQ9NY46 2000 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 ITPR1Q14643 2758 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 A0A1W2PP18 115 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 ANGPT2O15123 496 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 SRPX2O60687 465 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-227ENST00000548080 KRT16P08779 473 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 ITGAXP20702 1163 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 ASMTP46597 345 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 GCGRP47871 477 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 NUDT2P50583 147 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 RAP1GDS1P52306 607 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 CLNS1AP54105 237 aaKnown RBP16.45■□□□□ 0.22
HDAC7-227ENST00000548080 KCNJ2P63252 427 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 SLC25A3Q00325 362 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 ART3Q13508 389 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 DNASE1L3Q13609 305 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 MAP7Q14244 749 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 GRM7Q14831 915 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 PRTGQ2VWP7 1150 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 TMEM35AQ53FP2 167 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 ZNF385CQ66K41 422 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-227ENST00000548080 REP15Q6BDI9 236 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 RHBDD2Q6NTF9 364 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 CCDC81Q6ZN84 652 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 TMEM151BQ8IW70 566 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 KRTCAP2Q8N6L1 136 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 RGMAQ96B86 450 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 GBP5Q96PP8 586 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 CADM1Q9BY67 442 aaKnown RBP16.45■□□□□ 0.22
HDAC7-227ENST00000548080 NDE1Q9NXR1 346 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 MCM8Q9UJA3 840 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 MAU2Q9Y6X3 613 aa16.45■□□□□ 0.22
HDAC7-227ENST00000548080 KMT2BQ9UMN6 2715 aaPredicted RBP16.45■□□□□ 0.22
HDAC7-227ENST00000548080 GNG14A0A1W2PPG7 69 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 HYKKA2RU49 373 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 LRIT2A6NDA9 550 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 CCDC154A6NI56 674 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 PLPP1O14494 284 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 MRASO14807 208 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 NDUFS4O43181 175 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 PCDH7O60245 1069 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 PRMT3O60678 531 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 KLK3P07288 261 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-227ENST00000548080 PRPS1L1P21108 318 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 OR1D4P47884 311 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 COQ5Q5HYK3 327 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 ATP1A1-AS1Q5TC04 95 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 FAM198BQ6UWH4 519 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 C16orf89Q6UX73 402 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 PAGE2Q7Z2X7 111 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 PCYOX1LQ8NBM8 494 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 ZCCHC10Q8TBK6 192 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 KIAA1143Q96AT1 154 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-227ENST00000548080 QRFPRQ96P65 431 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 RAB3IPQ96QF0 476 aaPredicted RBP16.44■□□□□ 0.22
HDAC7-227ENST00000548080 CLMPQ9H6B4 373 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 SRPK3Q9UPE1 567 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 MAPRE3Q9UPY8 281 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 SSUH2Q9Y2M2 353 aa16.44■□□□□ 0.22
HDAC7-227ENST00000548080 FITM1A5D6W6 292 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 TERTO14746 1132 aaKnown RBP16.43■□□□□ 0.22
HDAC7-227ENST00000548080 DSCR3O14972 297 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 CFLARO15519 480 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 KLK1P06870 262 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 HBQ1P09105 142 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 PRKAR1AP10644 381 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 HNRNPH1P31943 449 aaKnown RBP16.43■□□□□ 0.22
HDAC7-227ENST00000548080 BSGP35613 385 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 C21orf58P58505 322 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 TLR1Q15399 786 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 ADPRMQ3LIE5 342 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 MLIPQ5VWP3 458 aa16.43■□□□□ 0.22
HDAC7-227ENST00000548080 PRSS41Q7RTY9 318 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms