RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 DYRK3O43781 588 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 PEX1O43933 1283 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 SCELO95171 688 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 TBX6O95947 436 aaPredicted RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 TGFB1P01137 390 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 GFAPP14136 432 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 EPORP19235 508 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 HIST1H1TP22492 207 aaPredicted RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 CPN2P22792 545 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 ATP5A1P25705 553 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 PPP2R1BP30154 601 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 TLX1P31314 330 aaPredicted RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 PIK3CBP42338 1070 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 SSR2P43308 183 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MEOX1P50221 254 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 SERPINB8P50452 374 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 ST13P50502 369 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 HNRNPFP52597 415 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 ARFIP1P53367 373 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 ALDH18A1P54886 795 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 SLC7A5Q01650 507 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 DLG1Q12959 904 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 SETDB1Q15047 1291 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 UAP1Q16222 522 aaPredicted RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 WHAMMP3Q1A5X7 153 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 DEPDC1Q5TB30 811 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MROH9Q5TGP6 573 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 LIPJQ5W064 366 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 OR4C11Q6IEV9 310 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 ADNP2Q6IQ32 1131 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 GRHL2Q6ISB3 625 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 METTL2BQ6P1Q9 378 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 PAOXQ6QHF9 649 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 TAOK1Q7L7X3 1001 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 UBE3DQ7Z6J8 389 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MYLK4Q86YV6 388 aaPredicted RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 SIAH3Q8IW03 269 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 SULF2Q8IWU5 870 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 TEX9Q8N6V9 391 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 TMEM52Q8NDY8 209 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MNS1Q8NEH6 495 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 OR7G3Q8NG95 312 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 OR8K3Q8NH51 312 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 KCTD4Q8WVF5 259 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 ITLN2Q8WWU7 325 aaPredicted RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 ASB15Q8WXK1 588 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MARVELD3Q96A59 401 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 RGMAQ96B86 450 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MRRFQ96E11 262 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 RBM18Q96H35 190 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 LRRC1Q9BTT6 524 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 TSPAN10Q9H1Z9 355 aaPredicted RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 ACTR8Q9H981 624 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 SNX15Q9NRS6 342 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 KCMF1Q9P0J7 381 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MYOTQ9UBF9 498 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 COPS7AQ9UBW8 275 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 PHF11Q9UIL8 331 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 ASB1Q9Y576 335 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 CLDN16Q9Y5I7 305 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 IKBKGQ9Y6K9 419 aa8.72□□□□□ -1.01
YBX3-218ENST00000546298 MDC1Q14676 2089 aaKnown RBP8.72□□□□□ -1.01
YBX3-218ENST00000546298 FLNCQ14315 2725 aa8.71□□□□□ -1.01
YBX3-218ENST00000546298 SVILO95425 2214 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ESYT3A0FGR9 886 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ARHGAP10A1A4S6 786 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 C17orf105B2RV13 164 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 TGFBR3LH3BV60 316 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 RTCAO00442 366 aaKnown RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 KLK8O60259 260 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 UGDHO60701 494 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 URI1O94763 535 aaPredicted RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 KLHL2O95198 593 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 TUBB4AP04350 444 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 INHBAP08476 426 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 RBP1P09455 135 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 MTHFD2P13995 350 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 PTX3P26022 381 aaPredicted RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 SLAMF1Q13291 335 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 DDX39BQ13838 428 aaKnown RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 PCBP2Q15366 365 aaKnown RBP eCLIP8.71□□□□□ -1.02
YBX3-218ENST00000546298 PFKFB4Q16877 469 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ZNF630Q2M218 657 aaPredicted RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 OPN5Q6U736 354 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ZNF793Q6ZN11 406 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 RGS9BPQ6ZS82 235 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 GPR180Q86V85 440 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ZNF227Q86WZ6 799 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 RELL1Q8IUW5 271 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 CENPLQ8N0S6 344 aaPredicted RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 CPSF7Q8N684 471 aaKnown RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 ZFP62Q8NB50 900 aaPredicted RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 HUS1BQ8NHY5 278 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 PHF10Q8WUB8 498 aaKnown RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 PTPMT1Q8WUK0 201 aaPredicted RBP8.71□□□□□ -1.02
YBX3-218ENST00000546298 TANKQ92844 425 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ATP6V1E2Q96A05 226 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 ART5Q96L15 291 aa8.71□□□□□ -1.02
YBX3-218ENST00000546298 SGCZQ96LD1 299 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms