RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 MAGEA5P43359 124 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 PPIAP62937 165 aaKnown RBP11.62□□□□□ -0.55
COPS7A-221ENST00000546229 PMPCAQ10713 525 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 GXYLT1Q4G148 440 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 FBXO48Q5FWF7 155 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 IL20RBQ6UXL0 311 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 NKAPQ8N5F7 415 aaKnown RBP11.62□□□□□ -0.55
COPS7A-221ENST00000546229 GOLM1Q8NBJ4 401 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 MORN4Q8NDC4 146 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 GABPB2Q8TAK5 448 aaPredicted RBP11.62□□□□□ -0.55
COPS7A-221ENST00000546229 SLC2A12Q8TD20 617 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF721Q8TF20 911 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 ANKRD9Q96BM1 317 aaPredicted RBP11.62□□□□□ -0.55
COPS7A-221ENST00000546229 SERINC2Q96SA4 455 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 TTYH2Q9BSA4 534 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 TMUB1Q9BVT8 246 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 DERL2Q9GZP9 239 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 REXO4Q9GZR2 422 aaKnown RBP11.62□□□□□ -0.55
COPS7A-221ENST00000546229 RHOJQ9H4E5 214 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 POPDC3Q9HBV1 291 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 PROK2Q9HC23 129 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 SEMA4BQ9NPR2 832 aaPredicted RBP11.62□□□□□ -0.55
COPS7A-221ENST00000546229 HPF1Q9NWY4 346 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 GPRC5BQ9NZH0 403 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 SPRR3Q9UBC9 169 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 Q9UFV3 132 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 ATG4BQ9Y4P1 393 aa11.62□□□□□ -0.55
COPS7A-221ENST00000546229 EXPH5Q8NEV8 1989 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 MYOCOSA0A1B0GUC4 107 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 LRRC3CA6NJW4 275 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 FOXO6A8MYZ6 492 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 NPIPA2E9PIF3 369 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 NPIPA3F8WFD2 350 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 AQP7O14520 342 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 B3GALT2O43825 422 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 CTNSO60931 367 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 PIAS1O75925 651 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 ACVR2AP27037 513 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 PLA2G16P53816 162 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 MTTPP55157 894 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 RNF4P78317 190 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 MGAT5Q09328 741 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 SLC13A2Q13183 592 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 OR4D1Q15615 310 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 ZKSCAN8Q15776 578 aaPredicted RBP11.61□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF750Q32MQ0 723 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF791Q3KP31 576 aaPredicted RBP11.61□□□□□ -0.55
COPS7A-221ENST00000546229 NDUFAF5Q5TEU4 345 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 HSDL2Q6YN16 418 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 RTL4Q6ZR62 310 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 RGS9BPQ6ZS82 235 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 SEM1Q6ZVN7 128 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 C9orf40Q8IXQ3 194 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 PDIK1LQ8N165 341 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 TMEM132CQ8N3T6 1108 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 FAM109AQ8N4B1 249 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 PDPRQ8NCN5 879 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 OR5M9Q8NGP3 310 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 OR14A16Q8NHC5 309 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 SREK1Q8WXA9 508 aaKnown RBP11.61□□□□□ -0.55
COPS7A-221ENST00000546229 ASB15Q8WXK1 588 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 VPS39Q96JC1 886 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 SMC6Q96SB8 1091 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 MAPKAP1Q9BPZ7 522 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 MS4A8Q9BY19 250 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 ZNF703Q9H7S9 590 aaPredicted RBP11.61□□□□□ -0.55
COPS7A-221ENST00000546229 IL1RL2Q9HB29 575 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 LYRM4Q9HD34 91 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 KCNJ16Q9NPI9 418 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 PPANQ9NQ55 473 aaKnown RBP11.61□□□□□ -0.55
COPS7A-221ENST00000546229 TUBA8Q9NY65 449 aaPredicted RBP11.61□□□□□ -0.55
COPS7A-221ENST00000546229 KIAA1549Q9HCM3 1950 aa11.61□□□□□ -0.55
COPS7A-221ENST00000546229 NSD1Q96L73 2696 aaPredicted RBP11.61□□□□□ -0.55
COPS7A-221ENST00000546229 GOLGA6L10A0A0M3HER8 536 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 SYNDIG1LA6NDD5 238 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 PABPN1LA6NDY0 278 aaKnown RBP11.6□□□□□ -0.55
COPS7A-221ENST00000546229 HRKO00198 91 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 BCKDKO14874 412 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 LDB3O75112 727 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 CLPSP04118 112 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 CD1EP15812 388 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 SAT1P21673 171 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 GMPRP36959 345 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 DNASE1L1P49184 302 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 PCDH1Q08174 1060 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 DOC2AQ14183 400 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 CDKL4Q5MAI5 379 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 TRIM40Q6P9F5 258 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 DGAT2L6Q6ZPD8 337 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 GK5Q6ZS86 529 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 ACAD11Q709F0 780 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 ANKMY2Q8IV38 441 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 SPATA6LQ8N4H0 392 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 ESAMQ96AP7 390 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 NTNG2Q96CW9 530 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 FAR2Q96K12 515 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 UBXN10Q96LJ8 280 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 F2RL3Q96RI0 385 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 EGFL8Q99944 293 aa11.6□□□□□ -0.55
COPS7A-221ENST00000546229 FAM173AQ9BQD7 235 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms