RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SOX14O95416 240 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 ETHE1O95571 254 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 ADAP00813 363 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 MSL3P1P0C860 447 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 AKR1A1P14550 325 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 NUDT1P36639 197 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 SLC9A3P48764 834 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 AP1S2P56377 157 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 B4GALNT1Q00973 533 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 GPR17Q13304 367 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 DOC2AQ14183 400 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 ZNF385BQ569K4 471 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 CRB2Q5IJ48 1285 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 HECTD3Q5T447 861 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 MZT2BQ6NZ67 158 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 TRIM40Q6P9F5 258 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 PAQR6Q6TCH4 344 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 CREB3L2Q70SY1 520 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 SLC38A6Q8IZM9 456 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 CBARPQ8N350 705 aaPredicted RBP13.57□□□□□ -0.24
SRP54-202ENST00000546080 AP3S1Q92572 193 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 ARHGAP39Q9C0H5 1083 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 BHLHE41Q9C0J9 482 aaPredicted RBP13.57□□□□□ -0.24
SRP54-202ENST00000546080 SGK2Q9HBY8 427 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 ATP13A2Q9NQ11 1180 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 TMPRSS11EQ9UL52 423 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 RAB23Q9ULC3 237 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 ANGPT4Q9Y264 503 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 DSPPQ9NZW4 1301 aa13.57□□□□□ -0.24
SRP54-202ENST00000546080 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 H3BN98 237 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 SLC16A5O15375 505 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 AKR7A2O43488 359 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 PROM1O43490 865 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 HCN1O60741 890 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 C6orf47O95873 294 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 SLC2A2P11168 524 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 HSD3B1P14060 373 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 HSD3B2P26439 372 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 CHI3L1P36222 383 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 SEMG2Q02383 582 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 ZNF630Q2M218 657 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 ZNF770Q6IQ21 691 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 FAM92BQ6ZTR7 304 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 USP30Q70CQ3 517 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 GLCCI1Q86VQ1 547 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 SPERTQ8NA61 448 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 TMEM203Q969S6 136 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 NECTIN4Q96NY8 510 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 ZIC5Q96T25 663 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 TRIM45Q9H8W5 580 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 BRF2Q9HAW0 419 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 MAP4K5Q9Y4K4 846 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 PIKFYVEQ9Y2I7 2098 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 SMIM30A4D0T7 59 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 AGAP14A8MT82 685 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 GFYI3L273 518 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 PRKAR1AP10644 381 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 CYP2A6P11509 494 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 IFI30P13284 250 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 TIA1P31483 386 aaKnown RBP eCLIP13.56□□□□□ -0.245e-9■■■■□ 19.7
SRP54-202ENST00000546080 CSKP41240 450 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 GSTM5P46439 218 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 EEF1A2Q05639 463 aaKnown RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 ATP13A5Q4VNC0 1218 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 SPIN4Q56A73 249 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 GRHL2Q6ISB3 625 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 RSPO2Q6UXX9 243 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 THOC6Q86W42 341 aaKnown RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 ZNF557Q8N988 423 aaPredicted RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 OR4M1Q8NGD0 313 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 OR5AK3PQ8NH89 298 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 ZC3HAV1LQ96H79 300 aaKnown RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 KCTD7Q96MP8 289 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 GTPBP2Q9BX10 602 aaKnown RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 C1GALT1Q9NS00 363 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 TMEM39AQ9NV64 488 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 RBFOX1Q9NWB1 397 aaKnown RBP13.56□□□□□ -0.24
SRP54-202ENST00000546080 HSPB11Q9Y547 144 aa13.56□□□□□ -0.24
SRP54-202ENST00000546080 VWA8A3KMH1 1905 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 TRBV4-1A0A0J9YWV2 114 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 IGFBP1P08833 259 aaPredicted RBP13.55□□□□□ -0.24
SRP54-202ENST00000546080 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
SRP54-202ENST00000546080 M6PRP20645 277 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 SDC2P34741 201 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 MAN2A2P49641 1150 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 ILKQ13418 452 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 MBTPS1Q14703 1052 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 RNLSQ5VYX0 342 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 C12orf73Q69YU5 71 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 ADNP2Q6IQ32 1131 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 BCDIN3DQ7Z5W3 292 aaKnown RBP13.55□□□□□ -0.24
SRP54-202ENST00000546080 TCEANCQ8N8B7 351 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 GOT1L1Q8NHS2 421 aaPredicted RBP13.55□□□□□ -0.24
SRP54-202ENST00000546080 CXorf40BQ96DE9 158 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 ASIC4Q96FT7 647 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 MAP6Q96JE9 813 aa13.55□□□□□ -0.24
SRP54-202ENST00000546080 SLC6A18Q96N87 628 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms