RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZSCAN26Q16670 478 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 DPY19L1Q2PZI1 675 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ADPRMQ3LIE5 342 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 GALNTL6Q49A17 601 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 CCSMST1Q4G0I0 132 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 TMTC4Q5T4D3 741 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 THEMIS2Q5TEJ8 643 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 PRAMEF9Q5VWM5 478 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 SLC6A19Q695T7 634 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 LCN10Q6JVE6 187 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ARMC6Q6NXE6 501 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 SPESP1Q6UW49 350 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 Q6ZSR9 355 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 GALNT12Q8IXK2 581 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 DSELQ8IZU8 1212 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 NATD1Q8N6N6 113 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ZNF655Q8N720 491 aaPredicted RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ENDOVQ8N8Q3 282 aaKnown RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 CDYL2Q8N8U2 506 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 FDCSPQ8NFU4 85 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 DNAJB8Q8NHS0 232 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 RFWD2Q8NHY2 731 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 FLVCR1-AS1Q8TAF5 88 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 SELENOMQ8WWX9 145 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 MR1Q95460 341 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 PNPLA2Q96AD5 504 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 PYCR2Q96C36 320 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ITPKCQ96DU7 683 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 CMTM5Q96DZ9 223 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 RILPQ96NA2 401 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 QRFPRQ96P65 431 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 OR2A14Q96R47 310 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 NUDT9Q9BW91 350 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 NLNQ9BYT8 704 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 NUF2Q9BZD4 464 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ROGDIQ9GZN7 287 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 CHST8Q9H2A9 424 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 TUBB1Q9H4B7 451 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ZNF385DQ9H6B1 395 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 MRPS30Q9NP92 439 aaKnown RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 HRASLS2Q9NWW9 162 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 C1orf109Q9NX04 203 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ACTR10Q9NZ32 417 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 NOP53Q9NZM5 478 aaKnown RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ZIM2Q9NZV7 527 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 HEY2Q9UBP5 337 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 TAC3Q9UHF0 121 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ZFP69BQ9UJL9 534 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 TCFL5Q9UL49 500 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 ZNF490Q9ULM2 529 aaPredicted RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 G3BP2Q9UN86 482 aaKnown RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 RUVBL1Q9Y265 456 aaKnown RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 RNF11Q9Y3C5 154 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 GPC6Q9Y625 555 aaPredicted RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 CFAP20Q9Y6A4 193 aaKnown RBP6.24□□□□□ -1.41
CDCA3-209ENST00000544610 AP1M2Q9Y6Q5 423 aa6.24□□□□□ -1.41
CDCA3-209ENST00000544610 A0A088AWK7 358 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SYNDIG1LA6NDD5 238 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ANKDD1BA6NHY2 528 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ENO4A6NNW6 628 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 BBIP1A8MTZ0 92 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CAPN14A8MX76 684 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 EREGO14944 169 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 PIP5K1BO14986 540 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 UBDO15205 165 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ZSCAN9O15535 394 aaPredicted RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 GUCY1B2O75343 617 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SCELO95171 688 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CLDN1O95832 211 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 KLK3P07288 261 aaPredicted RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 KITP10721 976 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CD22P20273 847 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ZNF10P21506 573 aaPredicted RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 JAK1P23458 1154 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 EPHA3P29320 983 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SERPINB3P29508 390 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 GRIA3P42263 894 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ASMTP46597 345 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 HNRNPFP52597 415 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CLNS1AP54105 237 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 FOXA1P55317 472 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ITGA1P56199 1179 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 STX1BP61266 288 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TRA2BP62995 288 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SKP1P63208 163 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CSNK1G2P78368 415 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 TGM3Q08188 693 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 FASTKQ14296 549 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SLBPQ14493 270 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 SQLEQ14534 574 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 KIAA0040Q15053 153 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 CPSF6Q16630 551 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 IMPG1Q17R60 797 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 EIF2S3LQ2VIR3 472 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 C18orf21Q32NC0 220 aaPredicted RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 LSM12Q3MHD2 195 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 PDCD4Q53EL6 469 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 ZC3H12BQ5HYM0 836 aaKnown RBP6.23□□□□□ -1.41
CDCA3-209ENST00000544610 C6orf136Q5SQH8 315 aa6.23□□□□□ -1.41
CDCA3-209ENST00000544610 DEPDC1Q5TB30 811 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms