RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TRIM46Q7Z4K8 759 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 NUDT13Q86X67 352 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 GBP7Q8N8V2 638 aaPredicted RBP17.95■□□□□ 0.46
DDX55-211ENST00000544429 FAM47BQ8NA70 645 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 C9orf43Q8TAL5 461 aaPredicted RBP17.95■□□□□ 0.46
DDX55-211ENST00000544429 PTCHD1Q96NR3 888 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 SMAD5Q99717 465 aaKnown RBP17.95■□□□□ 0.46
DDX55-211ENST00000544429 TUBB6Q9BUF5 446 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 NUDT9Q9BW91 350 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 ZNF552Q9H707 407 aaPredicted RBP17.95■□□□□ 0.46
DDX55-211ENST00000544429 ZNF160Q9HCG1 818 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 MS4A12Q9NXJ0 267 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 VPS29Q9UBQ0 182 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 ATG4BQ9Y4P1 393 aa17.95■□□□□ 0.46
DDX55-211ENST00000544429 IGHV3-20A0A0C4DH32 117 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 BLACEA4D250 179 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 BIRC5O15392 142 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 PROM1O43490 865 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 CTNSO60931 367 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 CHRNGP07510 517 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 FGF4P08620 206 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 CHN1P15882 459 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 PLAG1Q6DJT9 500 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 COMMD6Q7Z4G1 85 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 GPR180Q86V85 440 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 CHTF18Q8WVB6 975 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 PSMF1Q92530 271 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 SLC25A23Q9BV35 468 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 PRTFDC1Q9NRG1 225 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 LYARQ9NX58 379 aaKnown RBP17.94■□□□□ 0.46
DDX55-211ENST00000544429 GPR83Q9NYM4 423 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 PHF11Q9UIL8 331 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 SLC12A4Q9UP95 1085 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 MRPS33Q9Y291 106 aaKnown RBP17.94■□□□□ 0.46
DDX55-211ENST00000544429 TP53TG5Q9Y2B4 290 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 CCL27Q9Y4X3 112 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 PCDHGB7Q9Y5F8 929 aa17.94■□□□□ 0.46
DDX55-211ENST00000544429 NPIPB8E9PQR5 432 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 CLDN4O14493 209 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 SERPINA7P05543 415 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 FAM58BPP0C7Q3 252 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 PRR35P0CG20 571 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 UROSP10746 265 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 IGLV3-21P80748 117 aaPredicted RBP17.93■□□□□ 0.46
DDX55-211ENST00000544429 TNFRSF17Q02223 184 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 SFT2D3Q587I9 215 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 ARL13AQ5H913 290 aaPredicted RBP17.93■□□□□ 0.46
DDX55-211ENST00000544429 RIPOR1Q6ZS17 1223 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 ZCCHC23Q6ZST2 131 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 CUZD1Q86UP6 607 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 AMER2Q8N7J2 671 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 LHPPQ9H008 270 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 VIPAS39Q9H9C1 493 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 ARGLU1Q9NWB6 273 aaPredicted RBP17.93■□□□□ 0.46
DDX55-211ENST00000544429 NMRK1Q9NWW6 199 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 SIRT5Q9NXA8 310 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 AHSPQ9NZD4 102 aa17.93■□□□□ 0.46
DDX55-211ENST00000544429 A0A1W2PR48 441 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 SYNDIG1LA6NDD5 238 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 A6NL46 340 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 SEC24DO94855 1032 aaPredicted RBP17.92■□□□□ 0.46
DDX55-211ENST00000544429 GBAP04062 536 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 MAGOHP61326 146 aaKnown RBP17.92■□□□□ 0.46
DDX55-211ENST00000544429 TERF2Q15554 542 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 UGT3A2Q3SY77 523 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 LACTB2Q53H82 288 aaPredicted RBP17.92■□□□□ 0.46
DDX55-211ENST00000544429 VWA5B1Q5TIE3 1220 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 AGBL2Q5U5Z8 902 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 KANK2Q63ZY3 851 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 C18orf63Q68DL7 685 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 GALNT18Q6P9A2 607 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 PAPD4Q6PIY7 484 aaKnown RBP17.92■□□□□ 0.46
DDX55-211ENST00000544429 IGFL2Q6UWQ7 119 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 PAGE2Q7Z2X7 111 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 PARP9Q8IXQ6 854 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 KBTBD2Q8IY47 623 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 NFAM1Q8NET5 270 aaPredicted RBP17.92■□□□□ 0.46
DDX55-211ENST00000544429 ANKRD9Q96BM1 317 aaPredicted RBP17.92■□□□□ 0.46
DDX55-211ENST00000544429 PKNOX2Q96KN3 472 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 SH3GL2Q99962 352 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 SHCBP1LQ9BZQ2 653 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 FBXW2Q9UKT8 454 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 PPIEQ9UNP9 301 aaKnown RBP17.92■□□□□ 0.46
DDX55-211ENST00000544429 SPACA6W5XKT8 324 aa17.92■□□□□ 0.46
DDX55-211ENST00000544429 CNTRLQ7Z7A1 2325 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 TMEM120BA0PK00 339 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 GOLGA6L10A6NI86 522 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 AZIN1O14977 448 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 KLK1P06870 262 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 CELA2AP08217 269 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 ICAM2P13598 275 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 NR1D1P20393 614 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 CPN2P22792 545 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 PRPH2P23942 346 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 SERPINB3P29508 390 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 WDR4P57081 412 aaKnown RBP17.91■□□□□ 0.46
DDX55-211ENST00000544429 OR4D2P58180 307 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 RAE1P78406 368 aaKnown RBP17.91■□□□□ 0.46
DDX55-211ENST00000544429 HMGCS1Q01581 520 aa17.91■□□□□ 0.46
DDX55-211ENST00000544429 CLEC6AQ6EIG7 209 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms