RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 AIFM1O95831 613 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 LDLRP01130 860 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 RAP2AP10114 183 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 ST6GAL1P15907 406 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 TP53BP2Q13625 1128 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 FAM92BQ6ZTR7 304 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 PAGE2Q7Z2X7 111 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 R3HCC1LQ7Z5L2 792 aaKnown RBP12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SERPINA11Q86U17 422 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 OR2A5Q96R48 311 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 CSF3RQ99062 836 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 GPR27Q9NS67 375 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 PADI4Q9UM07 663 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SIT1Q9Y3P8 196 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 A0A1W2PR77 199 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 OR2W5A6NFC9 320 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 PDPK1O15530 556 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SEMA3DO95025 777 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 FKBP9O95302 570 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 CAPNS1P04632 268 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 CD27P26842 260 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 KDELR2P33947 212 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 VLDLRP98155 873 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 GPR19Q15760 415 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 ATP6AP1Q15904 470 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SPESP1Q6UW49 350 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 FKBP9P1Q75LS8 142 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 STK32CQ86UX6 486 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SYNPOQ8N3V7 929 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 MFSD9Q8NBP5 474 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 HSH2DQ96JZ2 352 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 RSPO3Q9BXY4 272 aaPredicted RBP12.97□□□□□ -0.33
HCFC2-202ENST00000544223 MUC13Q9H3R2 512 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 GLIPR2Q9H4G4 154 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SNX7Q9UNH6 387 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 DMTF1Q9Y222 760 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 TSC22D4Q9Y3Q8 395 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 ASB4Q9Y574 426 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 SEC16AO15027 2179 aa12.97□□□□□ -0.33
HCFC2-202ENST00000544223 TMEM229AB2RXF0 380 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 SCELO95171 688 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 NDUFS1P28331 727 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 SLC9A5Q14940 896 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 HEPACAMQ14CZ8 416 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 LTB4RQ15722 352 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 SPATS1Q496A3 300 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 TRIM40Q6P9F5 258 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 MSANTD1Q6ZTZ1 278 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 HORMAD2Q8N7B1 307 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 PAPD5Q8NDF8 572 aaKnown RBP12.96□□□□□ -0.33
HCFC2-202ENST00000544223 OR2L5Q8NG80 312 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 CYGBQ8WWM9 190 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 TMEM131Q92545 1883 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 CNRIP1Q96F85 164 aaPredicted RBP12.96□□□□□ -0.33
HCFC2-202ENST00000544223 RBCK1Q9BYM8 510 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
HCFC2-202ENST00000544223 DOLKQ9UPQ8 538 aa12.96□□□□□ -0.33
HCFC2-202ENST00000544223 OR2A25A4D2G3 310 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 DPPA5A6NC42 116 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 H0YGG7 62 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 K7ESF4 209 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 GNGT2O14610 69 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 NCBP2P52298 156 aaKnown RBP eCLIP12.96□□□□□ -0.34
HCFC2-202ENST00000544223 VSX2P58304 361 aaPredicted RBP12.96□□□□□ -0.34
HCFC2-202ENST00000544223 ARF3P61204 181 aaPredicted RBP12.96□□□□□ -0.34
HCFC2-202ENST00000544223 ABATP80404 500 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 MRPS35P82673 323 aaKnown RBP12.96□□□□□ -0.34
HCFC2-202ENST00000544223 BNIP3Q12983 259 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 SPDYE7PQ495Y7 208 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 C10orf62Q5T681 223 aaPredicted RBP12.96□□□□□ -0.34
HCFC2-202ENST00000544223 IRGCQ6NXR0 463 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 TMEM26Q6ZUK4 368 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 AVL9Q8NBF6 648 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 COL26A1Q96A83 441 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 PYURFQ96I23 114 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 ZNF597Q96LX8 424 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 KCNC2Q96PR1 638 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 PHF12Q96QT6 1004 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 SERHL2Q9H4I8 314 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 NT5DC2Q9H857 520 aa12.96□□□□□ -0.34
HCFC2-202ENST00000544223 ZNF282Q9UDV7 671 aaPredicted RBP12.96□□□□□ -0.34
HCFC2-202ENST00000544223 MYO1GB0I1T2 1018 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 FAM227AF5H4B4 570 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 PRIM2P49643 509 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 SIM1P81133 766 aaPredicted RBP12.95□□□□□ -0.34
HCFC2-202ENST00000544223 ADPRMQ3LIE5 342 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 CPZQ66K79 652 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 PPP4R4Q6NUP7 873 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 UGT2A3Q6UWM9 527 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 ASPGQ86U10 573 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 ARL14Q8N4G2 192 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 SPEM1Q8N4L4 309 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 UTP15Q8TED0 518 aaKnown RBP12.95□□□□□ -0.34
HCFC2-202ENST00000544223 STARD8Q92502 1023 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 KAT2AQ92830 837 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 CHRDQ9H2X0 955 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 EQTNQ9NQ60 294 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 CACNA1EQ15878 2313 aa12.95□□□□□ -0.34
HCFC2-202ENST00000544223 TP53BP1Q12888 1972 aaPredicted RBP12.95□□□□□ -0.34
HCFC2-202ENST00000544223 TNFRSF21O75509 655 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms