RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 ITPKBP27987 946 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 OTX2P32243 289 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TLE3Q04726 772 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 KIAA0040Q15053 153 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C6orf136Q5SQH8 315 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 VWA5B1Q5TIE3 1220 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FAAH2Q6GMR7 532 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NOXRED1Q6NXP6 359 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GALNT18Q6P9A2 607 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TMEM151BQ8IW70 566 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ZNF595Q8IYB9 648 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FNDC5Q8NAU1 212 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 METTL21AQ8WXB1 218 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 VN1R1Q9GZP7 353 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PRTFDC1Q9NRG1 225 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SEMA3GQ9NS98 782 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SIRT5Q9NXA8 310 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TEX10Q9NXF1 929 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FREM2Q5SZK8 3169 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 URB1O60287 2271 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 A0A087WV48 116 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 A0A1W2PR48 441 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 BLACEA4D250 179 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 DIAPH2O60879 1101 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 IGHEP01854 428 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 UMODP07911 640 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NR2F6P10588 404 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PRKAR1AP10644 381 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 WT1P19544 449 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MAPK1P28482 360 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GSTM5P46439 218 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TAS2R50P59544 299 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TRA2BP62995 288 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 BTG2P78543 158 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MC1RQ01726 317 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ZNF763Q0D2J5 394 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SLC13A2Q13183 592 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MAD2L1Q13257 205 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 IL10RAQ13651 578 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NDUFAF5Q5TEU4 345 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C18orf63Q68DL7 685 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NXNQ6DKJ4 435 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 RAB43Q86YS6 212 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TMEM52Q8NDY8 209 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C16orf78Q8WTQ4 265 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TM4SF18Q96CE8 201 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C11orf24Q96F05 449 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PTCHD1Q96NR3 888 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CNTNAP3BQ96NU0 1288 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C1orf50Q9BV19 199 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FAIM2Q9BWQ8 316 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CNTNAP3Q9BZ76 1288 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 RPF2Q9H7B2 306 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 AKTIPQ9H8T0 292 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ZMIZ1Q9ULJ6 1067 aa13.63□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GOLGA8QA0A0J9YX86 632 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CDC14CA4D256 554 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GOLGA8OA6NCC3 632 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GLOD5A6NK44 160 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GOLGA8NF8WBI6 632 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SDHDO14521 159 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 POLR3GO15318 223 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NKX2-8O15522 239 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EFSO43281 561 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ALOX12BO75342 701 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PRKRAO75569 313 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 AIFM1O95831 613 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C8orf89P0DMQ9 161 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MAOAP21397 527 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MMP11P24347 488 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ALDH9A1P49189 494 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 HNRNPFP52597 415 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GYS2P54840 703 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 UCNP55089 124 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 HSD17B7P56937 341 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TMPRSS3P57727 454 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 RHAGQ02094 409 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NSDHLQ15738 373 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 QSOX2Q6ZRP7 698 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CLNKQ7Z7G1 428 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TMEM132CQ8N3T6 1108 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 THOC1Q96FV9 657 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CCDC134Q9H6E4 229 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 WDR55Q9H6Y2 383 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PRDM9Q9NQV7 894 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EIF3LQ9Y262 564 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 DLGAP4Q9Y2H0 992 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MMACHCQ9Y4U1 282 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ACACAQ13085 2346 aa13.62□□□□□ -0.23
TNFRSF1A-216ENST00000543995 APC2O95996 2303 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C1orf226A1L170 272 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 LDB3O75112 727 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TGDSO95455 350 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 RECKO95980 971 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CYC1P08574 325 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 IL3P08700 152 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 LBPP18428 481 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms