RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 HNRNPFP52597 415 aaKnown RBP12.21□□□□□ -0.45
RTN3-213ENST00000543552 PHEXP78562 749 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 MRPS25P82663 173 aaKnown RBP12.21□□□□□ -0.45
RTN3-213ENST00000543552 C2orf54Q08AI8 447 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 BIKQ13323 160 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 AP5B1Q2VPB7 878 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 KBTBD12Q3ZCT8 623 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 FBXO48Q5FWF7 155 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 ARHGAP11AQ6P4F7 1023 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 RGS9BPQ6ZS82 235 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 CLNKQ7Z7G1 428 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 PSD4Q8NDX1 1056 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 TMEM52Q8NDY8 209 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 OR5L2Q8NGL0 311 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 OR8K3Q8NH51 312 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 C16orf52Q8NHV5 167 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 UBTD2Q8WUN7 234 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 MTFMTQ96DP5 389 aaKnown RBP12.21□□□□□ -0.45
RTN3-213ENST00000543552 CMTM7Q96FZ5 175 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 CSF3RQ99062 836 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 ALOXE3Q9BYJ1 711 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 MS4A12Q9NXJ0 267 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 MYOTQ9UBF9 498 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 PPT2Q9UMR5 302 aa12.21□□□□□ -0.45
RTN3-213ENST00000543552 TACC2O95359 2948 aa12.21□□□□□ -0.46
RTN3-213ENST00000543552 PCNX1Q96RV3 2341 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 DCHS2Q6V1P9 2916 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 A0A087X1B8 175 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 TGFBR3LH3BV60 316 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 CDC40O60508 579 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTN3-213ENST00000543552 OR2J2O76002 312 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 WISP2O76076 250 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 SCELO95171 688 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 TBX6O95947 436 aaPredicted RBP12.2□□□□□ -0.46
RTN3-213ENST00000543552 SLC35E2BP0CK96 405 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 PCNAP12004 261 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 EPB42P16452 691 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 CD22P20273 847 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 ATP5A1P25705 553 aaKnown RBP12.2□□□□□ -0.46
RTN3-213ENST00000543552 ELAVL4P26378 380 aaKnown RBP12.2□□□□□ -0.46
RTN3-213ENST00000543552 PTGER1P34995 402 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 GPR143P51810 404 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 RAP1GDS1P52306 607 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 GPX6P59796 221 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 HSF1Q00613 529 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 E2F2Q14209 437 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 FAM83EQ2M2I3 478 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 TMEM211Q6ICI0 200 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 KLC3Q6P597 504 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 GK5Q6ZS86 529 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 LAS2Q8IYD9 372 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 ACOT4Q8N9L9 421 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 FAM57AQ8TBR7 257 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 FBXO25Q8TCJ0 367 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 ZNF473Q8WTR7 871 aaKnown RBP12.2□□□□□ -0.46
RTN3-213ENST00000543552 CA5BP1Q8WTZ4 195 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 ESAMQ96AP7 390 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 REPS1Q96D71 796 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 PHF12Q96QT6 1004 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 OR8D2Q9GZM6 311 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 PRDM7Q9NQW5 492 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 RYDENQ9NUL5 291 aaKnown RBP12.2□□□□□ -0.46
RTN3-213ENST00000543552 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTN3-213ENST00000543552 KCMF1Q9P0J7 381 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 PHF11Q9UIL8 331 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 ZNF223Q9UK11 482 aaPredicted RBP12.2□□□□□ -0.46
RTN3-213ENST00000543552 ACOT9Q9Y305 439 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 ASB1Q9Y576 335 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 ANGPTL3Q9Y5C1 460 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 CLDN16Q9Y5I7 305 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 NCOA6Q14686 2063 aaPredicted RBP12.2□□□□□ -0.46
RTN3-213ENST00000543552 OTOGQ6ZRI0 2925 aa12.2□□□□□ -0.46
RTN3-213ENST00000543552 C17orf105B2RV13 164 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 FANCGO15287 622 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 HS6ST1O60243 411 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 PRAMEF4O60810 478 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 TPOP07202 933 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 EPORP19235 508 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 CPN2P22792 545 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 SSTR2P30874 369 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 TLX1P31314 330 aaPredicted RBP12.19□□□□□ -0.46
RTN3-213ENST00000543552 RFC3P40938 356 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 PIK3CBP42338 1070 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 PIK3CGP48736 1102 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 ARFIP1P53367 373 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 GPR85P60893 370 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 PLGLB1Q02325 96 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 PCDH1Q08174 1060 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 NDUFAF5Q5TEU4 345 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 PRAMEF9Q5VWM5 478 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 KHDRBS2Q5VWX1 349 aaKnown RBP12.19□□□□□ -0.46
RTN3-213ENST00000543552 ADNP2Q6IQ32 1131 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 GRHL2Q6ISB3 625 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 OPN5Q6U736 354 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 RTL4Q6ZR62 310 aa12.19□□□□□ -0.46
RTN3-213ENST00000543552 CEP128Q6ZU80 1094 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms