RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 MS4A12Q9NXJ0 267 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 CCDC59Q9P031 241 aaKnown RBP12.86□□□□□ -0.35
PPME1-208ENST00000543525 TAAR2Q9P1P5 351 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 PAIP2BQ9ULR5 123 aaKnown RBP12.86□□□□□ -0.35
PPME1-208ENST00000543525 SNX8Q9Y5X2 465 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 PCM1Q15154 2024 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 TBX19O60806 448 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 SEMA3DO95025 777 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 ADH1CP00326 375 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 DBTP11182 482 aaKnown RBP12.86□□□□□ -0.35
PPME1-208ENST00000543525 ITGB8P26012 769 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 TPP2P29144 1249 aaPredicted RBP12.86□□□□□ -0.35
PPME1-208ENST00000543525 CRISP1P54107 249 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 NFE2L1Q14494 772 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 FNDC3BQ53EP0 1204 aaKnown RBP12.86□□□□□ -0.35
PPME1-208ENST00000543525 ARMCX4Q5H9R4 360 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 VN1R5Q7Z5H4 357 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 SNX29P2Q8IUI4 249 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 AQP11Q8NBQ7 271 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 ZNF740Q8NDX6 193 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
PPME1-208ENST00000543525 CXorf36Q9H7Y0 433 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 PELI2Q9HAT8 420 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 A4GALTQ9NPC4 353 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 CNOT2Q9NZN8 540 aaKnown RBP12.86□□□□□ -0.35
PPME1-208ENST00000543525 ASF1AQ9Y294 204 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 SLC27A6Q9Y2P4 619 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 PCDHGA3Q9Y5H0 932 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
PPME1-208ENST00000543525 EDDM13A0A1B0GTR0 161 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 ANKDD1BA6NHY2 528 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 ZAR1LA6NP61 321 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 HOXC11O43248 304 aaPredicted RBP12.85□□□□□ -0.35
PPME1-208ENST00000543525 MMP20O60882 483 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 HNRNPA1P09651 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
PPME1-208ENST00000543525 DDCP20711 480 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 CXCR2P25025 360 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 S100A5P33763 92 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 EIF2DP41214 584 aaKnown RBP12.85□□□□□ -0.35
PPME1-208ENST00000543525 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
PPME1-208ENST00000543525 RPA4Q13156 261 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 GANABQ14697 944 aaKnown RBP12.85□□□□□ -0.35
PPME1-208ENST00000543525 PTGES3Q15185 160 aaKnown RBP12.85□□□□□ -0.35
PPME1-208ENST00000543525 ZNF181Q2M3W8 571 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 TMEM52BQ4KMG9 183 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 SAXO2Q658L1 398 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 CEACAM20Q6UY09 585 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 SLC22A16Q86VW1 577 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 C17orf64Q86WR6 236 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 FAM129CQ86XR2 697 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 ZNF547Q8IVP9 402 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 C7orf61Q8IZ16 206 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 NEURL3Q96EH8 262 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 PDXPQ96GD0 296 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 QRFPRQ96P65 431 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 IL17FQ96PD4 163 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 SORBS1Q9BX66 1292 aaKnown RBP12.85□□□□□ -0.35
PPME1-208ENST00000543525 CDCA4Q9BXL8 241 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
PPME1-208ENST00000543525 OR52A5Q9H2C5 316 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 RHBGQ9H310 441 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 FTSJ1Q9UET6 329 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 TMCC3Q9ULS5 477 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 KLK4Q9Y5K2 254 aa12.85□□□□□ -0.35
PPME1-208ENST00000543525 AGAP5A6NIR3 686 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 PDPK1O15530 556 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 SH3BP5O60239 455 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 ADAM23O75077 832 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 UPK1BO75841 260 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 PDE9AO76083 593 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 PTHP01270 115 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 POU2F1P14859 743 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 SERPINB1P30740 379 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 HSD17B2P37059 387 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 ALDH9A1P49189 494 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 RGS6P49758 472 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 METAP1P53582 386 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 MAPK12P53778 367 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 FPGSQ05932 587 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.84□□□□□ -0.35
PPME1-208ENST00000543525 DNASE1L3Q13609 305 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 TIMM50Q3ZCQ8 353 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 KLHL17Q6TDP4 642 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 PTCHD4Q6ZW05 846 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 GRASPQ7Z6J2 395 aaPredicted RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 DCUN1D3Q8IWE4 304 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 CELF5Q8N6W0 485 aaKnown RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 B3GNT7Q8NFL0 401 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 ING5Q8WYH8 240 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 AIF1LQ9BQI0 150 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 C6orf62Q9GZU0 229 aaPredicted RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 SP140LQ9H930 580 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 NMNAT1Q9HAN9 279 aaPredicted RBP12.84□□□□□ -0.35
PPME1-208ENST00000543525 DYRK4Q9NR20 520 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 KCND3Q9UK17 655 aa12.84□□□□□ -0.35
PPME1-208ENST00000543525 LOC100506127A0A0U1RQW1 187 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms