RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ARMC10Q8N2F6 343 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 OSTF1Q92882 214 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 LRR1Q96L50 414 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 KXD1Q9BQD3 176 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 CDADC1Q9BWV3 514 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 FLRT2O43155 660 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 TRIM3O75382 744 aaPredicted RBP18.61■□□□□ 0.57
SUDS3-204ENST00000543473 ALPLP05186 524 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 RHCEP18577 417 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 SPRED1Q7Z699 444 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 KIF18BQ86Y91 864 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 LSMEM2Q8N112 164 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 CD180Q99467 661 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 TMEM175Q9BSA9 504 aa18.61■□□□□ 0.57
SUDS3-204ENST00000543473 CNR2P34972 360 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 OR12D2P58182 307 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 CXCR4P61073 352 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 NTRK2Q16620 822 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 C18orf21Q32NC0 220 aaPredicted RBP18.6■□□□□ 0.57
SUDS3-204ENST00000543473 QSOX2Q6ZRP7 698 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 GALNTL5Q7Z4T8 443 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 AMZ2Q86W34 360 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 ATCAYQ86WG3 371 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 TMEM40Q8WWA1 233 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 GATAD2BQ8WXI9 593 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 GORASP2Q9H8Y8 452 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 PCDHGA4Q9Y5G9 962 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 ALG5Q9Y673 324 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 METTL21EPA6NDL7 271 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 GHRHRQ02643 423 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 RAB12Q6IQ22 244 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 KLHL24Q6TFL4 600 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 CLEC14AQ86T13 490 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 FAM129CQ86XR2 697 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 SETD6Q8TBK2 473 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 ZCCHC10Q8TBK6 192 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 MS4A4AQ96JQ5 239 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 SECISBP2Q96T21 854 aaKnown RBP18.6■□□□□ 0.57
SUDS3-204ENST00000543473 TREM1Q9NP99 234 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 SOHLH2Q9NX45 425 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 UTS2RQ9UKP6 389 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 PCDH17O14917 1159 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 TAS2R43P59537 309 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 GPR17Q13304 367 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 ALG11Q2TAA5 492 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 ANKRD54Q6NXT1 300 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 CLECL1Q8IZS7 167 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 LRRC72A6NJI9 287 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 RP2O75695 350 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 TACSTD2P09758 323 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 LASP1Q14847 261 aaKnown RBP18.6■□□□□ 0.57
SUDS3-204ENST00000543473 TRAM2Q15035 370 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 SLC35F1Q5T1Q4 408 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 AGAP7PQ5VUJ5 663 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 TXNDC8Q6A555 127 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 GDPD4Q6W3E5 623 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 SPERTQ8NA61 448 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 PSD4Q8NDX1 1056 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 HDHD5Q9BXW7 423 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 ACOT13Q9NPJ3 140 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 IFT46Q9NQC8 304 aa18.6■□□□□ 0.57
SUDS3-204ENST00000543473 DUS2Q9NX74 493 aaKnown RBP18.6■□□□□ 0.57
SUDS3-204ENST00000543473 STRCP1A6NGW2 1772 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 SNAPC5O75971 98 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 HOXA11P31270 313 aaPredicted RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 EIF5AP63241 154 aaKnown RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 FGFBP1Q14512 234 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 PSRC1Q6PGN9 363 aaPredicted RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 GDPGP1Q6ZNW5 385 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 SDR16C5Q8N3Y7 309 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 S100A16Q96FQ6 103 aaKnown RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 MEIOCA2RUB1 952 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 ARNTLO00327 626 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 PCCBP05166 539 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 CSN2P05814 226 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 GJA1P17302 382 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 GNALP38405 381 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 FNTBP49356 437 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 MAN2A2P49641 1150 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 EIF4HQ15056 248 aaKnown RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 SNAP47Q5SQN1 464 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF691Q5VV52 312 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 TRNP1Q6NT89 227 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 GPALPP1Q8IXQ4 340 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF366Q8N895 744 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 ZFP41Q8N8Y5 198 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 TRIB3Q96RU7 358 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 MROQ9BYG7 248 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 CST11Q9H112 138 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 COQ3Q9NZJ6 369 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 MAGEA3P43357 314 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 SNTB2Q13425 540 aaKnown RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 MUL1Q969V5 352 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 WDR83Q9BRX9 315 aaKnown RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 INPP5KQ9BT40 448 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 MKKSQ9NPJ1 570 aaPredicted RBP18.59■□□□□ 0.57
SUDS3-204ENST00000543473 ZNF639Q9UID6 485 aa18.59■□□□□ 0.57
SUDS3-204ENST00000543473 TRBV23OR9-2A0A075B6M9 112 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 EPHX1P07099 455 aa18.58■□□□□ 0.57
SUDS3-204ENST00000543473 RPS17P08708 135 aaKnown RBP18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms