RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 REEP4Q9H6H4 257 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CLK4Q9HAZ1 481 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CSNK1G1Q9HCP0 422 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CENPMQ9NSP4 180 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ENTPD2Q9Y5L3 495 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TRBC2A0A5B9 178 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ARHGEF33A8MVX0 844 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 E7EQ34 232 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 FAM227AF5H4B4 570 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 BCAT2O15382 392 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 HCRTR2O43614 444 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ANGPTL1O95841 491 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 C6orf47O95873 294 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 EIF1AXP47813 144 aaKnown RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 AGTR2P50052 363 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 AKR1D1P51857 326 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ST3GAL3Q11203 375 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 NSDHLQ15738 373 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF678Q5SXM1 525 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 C6orf15Q6UXA7 325 aaPredicted RBP6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TIFABQ6ZNK6 161 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 GHDCQ8N2G8 530 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 FITM2Q8N6M3 262 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TMIEQ8NEW7 156 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 OR5T3Q8NGG3 340 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 RHEBL1Q8TAI7 183 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 EDAQ92838 391 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CMKLR1Q99788 373 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 G6PC3Q9BUM1 346 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 CHID1Q9BWS9 393 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 TRIM36Q9NQ86 728 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 ZDHHC2Q9UIJ5 367 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 WASF2Q9Y6W5 498 aa6.63□□□□□ -1.35
SRGAP1-206ENST00000543397 KIR2DS5A0A0G2JLQ3 304 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 A0A0G2JNG1 304 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 C1orf226A1L170 272 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 NPIPB15A6NHN6 443 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 A6NHS1 94 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 KIR2DS3K7RE56 304 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 HAT1O14929 419 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RGS10O43665 173 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 GPR37L1O60883 481 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 H1F0P07305 194 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 HSD3B1P14060 373 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CD9P21926 228 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PSMA1P25786 263 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC6A4P31645 630 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 NR1H2P55055 460 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 SLAMF1Q13291 335 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 KIR2DS5Q14953 304 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 GRIN2CQ14957 1233 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 IGSF11Q5DX21 431 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PRPF38BQ5VTL8 546 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 OR52E8Q6IFG1 317 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 FRMD7Q6ZUT3 714 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 AKAP14Q86UN6 197 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CELF2-AS1Q8N7Q2 184 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PROKR2Q8NFJ6 384 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 OR4K1Q8NGD4 311 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CAPSLQ8WWF8 208 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 LRRC58Q96CX6 371 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 DMRTB1Q96MA1 342 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ZSWIM3Q96MP5 696 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 S100A14Q9HCY8 104 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM138Q9NPI0 162 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 MARCH4Q9P2E8 410 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 EXOGQ9Y2C4 368 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 UBE2QL1A1L167 161 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 H3BNC9 293 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ACOT7O00154 380 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ITM2AO43736 263 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RCBTB2O95199 551 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 IFNA6P05013 189 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 EDN1P05305 212 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 IL1RNP18510 177 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 G0S2P27469 103 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 BMP8BP34820 402 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CCR9P51686 369 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 WDR4P57081 412 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 XIAPP98170 497 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 MC1RQ01726 317 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 FOLH1Q04609 750 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 DCTN2Q13561 401 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 NR0B2Q15466 257 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 FLYWCH1Q4VC44 716 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM35AQ53FP2 167 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CLVS2Q5SYC1 327 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ABHD17BQ5VST6 288 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CXorf57Q6NSI4 855 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM214Q6NUQ4 689 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 KLHL17Q6TDP4 642 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RASSF6Q6ZTQ3 369 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PARS2Q7L3T8 475 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 BMP8AQ7Z5Y6 402 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RAB43Q86YS6 212 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 KBTBD2Q8IY47 623 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CBR4Q8N4T8 237 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RFT1Q96AA3 541 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PRR11Q96HE9 360 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms